Pleurodeles waltl (Iberian ribbed newt): 138301422
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Entry
138301422 CDS
T10800
Symbol
RXRB
Name
(RefSeq) retinoic acid receptor RXR-beta
KO
K08525
retinoid X receptor beta
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03320
PPAR signaling pathway
pwl04920
Adipocytokine signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09150 Organismal Systems
09152 Endocrine system
04920 Adipocytokine signaling pathway
138301422 (RXRB)
03320 PPAR signaling pathway
138301422 (RXRB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138301422 (RXRB)
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
pwl03310
]
138301422 (RXRB)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Zinc finger
Cys4 hepatocyte nuclear factor 4-like
138301422 (RXRB)
Nuclear receptors [BR:
pwl03310
]
2. Hepatocyte nuclear factor 4 like
2B. Retinoid X receptor (RXR)
138301422 (RXRB)
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Gene cluster
GFIT
Motif
Pfam:
Hormone_recep
zf-C4
Nuc_recep-AF1
tRNA_bind_3
Motif
Other DBs
NCBI-GeneID:
138301422
NCBI-ProteinID:
XP_069097997
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All DBs
Position
6:1709667195..1709795228
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AA seq
453 aa
AA seq
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MGDSRDCRSPDSSSLSSSPHPRPYCHSPPSPTPLHPSMIGSAMTSSVNSPMGSLGSPFSV
ISSSLGSPGMPSTPSIGYGPVSSPQINSTVNLSGHHTVSSSDDVKPPLGMRGLPSHPHGG
MLSSKRLCAICGDRSSGKHYGVYSCEGCKGFFKRTIRKDLTYTCRDNKDCIVDKRQRNRC
QYCRYQKCLATGMKREAVQEERQRGRDRDGDMEYSSGVNEEMPVDKILEAELAVEQKSDQ
SVDGSGTGGSSPNDPVTNICQAADKQLFTLVEWAKRIPHFSELPLDDQVILLRAGWNELL
IASFSHRSISVKDGILLATGLHVHRNSAHSAGVGAIFDRVLTELVSKMRDMRMDKTELGC
LRAIILFNPDAKGLSNPGEVELLREKVYASLESYCKQKYPDQQGRFAKLLLRLPALRSIG
LKCLEHLFFFKLIGDTPIDTFLMEMLEAPHQLS
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgggagacagccgggactgcaggagcccagacagttcgtccctcagttcttctccgcac
cctcgtccgtactgccattctcccccttctccaactcctctacatccctccatgatcggc
tcagcgatgacctcctctgttaactcacccatggggagcctggggtccccattttcagtc
atcagctcatctctgggctcccctggaatgccctccactccgtccataggatatggacct
gtgagcagcccgcagattaattccacggttaacctttcgggccaccacacagtgagtagc
tctgatgatgtgaagccgccacttggaatgagggggctgccttcccaccctcatggaggc
atgctgtctagcaagaggctctgtgctatctgtggtgatcgatcctcaggcaaacattat
ggcgtgtacagctgtgagggctgcaaggggttcttcaagcgaaccattcgaaaggacctt
acgtacacatgccgggacaacaaagactgtattgtggacaagcgtcaaaggaatcgctgc
cagtactgtcggtaccagaagtgtcttgccacaggcatgaagagagaagctgtacaggag
gagcggcagcgaggccgagaccgggatggagatatggagtacagcagtggtgtgaacgag
gaaatgcctgtagacaagattctggaagcggagttggcggtggagcagaaatctgatcag
agcgttgatgggtctgggaccggtggcagttctcccaatgacccagtgactaacatctgc
caggcagccgacaagcagcttttcaccctcgtggagtgggccaagcgcatcccgcacttc
tctgagcttcccctagacgaccaggtcatcttgttgcgagctggttggaatgagctgctc
attgcctctttttcacatcggtccatctctgtaaaggatggcatcctgctggcgactggt
ctccatgtacaccggaacagtgcacacagtgcaggggtcggtgccatctttgacagagtt
ttgactgaactagtctcaaaaatgagggacatgcggatggacaagactgaactgggctgc
ctacgagccatcatcctctttaacccagatgccaaggggctctcaaaccctggggaagtg
gagctgttacgagaaaaagtatatgcatcactggagtcttactgcaagcaaaagtacccg
gatcaacagggcaggtttgcgaagctactgctccgccttccagctctccgctccattggg
ctgaagtgcctggagcacctattcttcttcaagctaatcggagacaccccaatcgacacc
ttcttgatggaaatgctcgaggctcctcaccagctctcctga
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