Pleurodeles waltl (Iberian ribbed newt): 138301442
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Entry
138301442 CDS
T10800
Symbol
VARS2
Name
(RefSeq) valine--tRNA ligase, mitochondrial isoform X1
KO
K01873
valyl-tRNA synthetase [EC:
6.1.1.9
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
138301442 (VARS2)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pwl01007
]
138301442 (VARS2)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwl03016
]
138301442 (VARS2)
Enzymes [BR:
pwl01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.9 valine---tRNA ligase
138301442 (VARS2)
Amino acid related enzymes [BR:
pwl01007
]
Aminoacyl-tRNA synthetase
Class I (U)
138301442 (VARS2)
Transfer RNA biogenesis [BR:
pwl03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
138301442 (VARS2)
Prokaryotic type
138301442 (VARS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1
Anticodon_1
tRNA-synt_1g
tRNA-synt_1_2
tRNA-synt_1e
Val_tRNA-synt_C
Motif
Other DBs
NCBI-GeneID:
138301442
NCBI-ProteinID:
XP_069098040
LinkDB
All DBs
Position
6:1716112368..1716252937
Genome browser
AA seq
1087 aa
AA seq
DB search
MLRLSLGTRHGPSQVWAHLLLPTRGAGYVDVKPWVLSRSWTSEAAGPSAQASRLRNKSEK
ERRQREKQQAIDARLSLAETKVSRGQAKAWKKKEVIPYSGATELGQKKDTSVPLPSSYSP
CYVEAAWYHWWVKEGFFKPENQRRLPHAQERTFSLCIPPPNVTGSLHLGHALTVAVEDAL
VRWRRMQGWRVLWVPGSDHAGIATQAVVERYLWKERGLRRHSLGREEFLREVWKWKEEKG
DEIFHQLRTLGASLDWDRACFTMDPKFSLAVTEAFVRLHEDGLVYRRRKLVNWSCALRST
ISDIEVESRALSGRTYLSVPGYQEKIPFGLMVTFAYKVDGEDQEVCVATTRPETMLGDVA
VAVHPEDSRYLGFHGKRLRHPFTDRLLPIITDCLVDPEVGTGAVKVTPGHSPVDHELGLA
HGLPLVSVIGEDGAMMAECGDWLQGVGRFHARDKVVAALRQQGLYRGTRDHSMLLPVCSR
SGDVVEYLFKSQWFVRCAEMAKSASQAVDSGRLQIIPSVHGKVWKKWLSDISDWCVSRQL
WWGHQVPAYMVSDLQSSNSPQDESEAFWVVARSEAEALKKAAEMLGTPEQDILLRRDPDV
LDTWFSSGLFPFAMLGWPEQTQDLSQFYPNSLLETGSDLIFFWVARMVMLGQQLTGQLPF
SQVFLHSMVRDAHGRKMSKSLGNVLDPLDVISGVSLQRLHEKLRDGNLDPREVALAEEGQ
RRDFPSGIPECGTDALRFALCSHRVQGDDLNLDVAAVLSIRHFCNKVWNSLKFTLAALGE
EFSPVPLGELSPTSPMDVWICSRLSQTVSDCGRHFADYELHSVTSAIHGFWLQNFCDVYL
ESVKPVLRAGDPPRVRGVQQVLFWCSEVSLRLLAPFMPFLAEELWQRLPRRGDAPAPSIC
VAPYPCGQQLAHWRQPRVESDLLFVQDVVRAIRALRVGYQLSRARPEVTVICPEEGMARI
LQEYQEPLQTLSLSGTLRVLPLAGERTPARCAVGVVNEQCRVYLSLQGLVDPQQELLRLA
PRQQKLERQLWELRARMEAEGYSEKHPQSVQDEHRRKIIALETEAARLAEVAQSFQRLLS
EGEETGV
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atgctgcgactctctcttggtactcggcatgggcccagccaggtctgggcccatcttctg
ctgccgaccaggggagctggctatgttgacgtgaagccctgggtgttgagcaggtcgtgg
acctctgaggctgctggaccttcggctcaggcctctcggctgagaaacaagtctgagaag
gagcgtcgtcaacgagaaaagcagcaagctatagacgcgcggctaagcctagctgagacc
aaggtgtccaggggtcaggcgaaggcttggaagaagaaggaggtgattccttatagcggc
gccacagagctggggcagaagaaagacacatcagtgccgctgcccagctcctacagcccg
tgctacgttgaagctgcctggtaccactggtgggtgaaagagggcttcttcaagcctgaa
aatcagagacggctgcctcatgcgcaagagcggaccttctccctctgcatcccaccgccg
aacgtcaccggctcgctccacctcggacatgcgctcaccgtcgccgtggaggatgccctt
gtgcgctggaggagaatgcagggatggagagtactgtgggtgccggggtccgatcacgcg
gggattgccactcaggcggtggtggagcggtacctctggaaggagcgggggctccgcagg
cactccctagggcgggaagagtttctccgcgaagtctggaagtggaaagaagagaaaggg
gatgagatcttccaccagctgcggaccctgggagcctccctggactgggaccgcgcctgc
ttcaccatggacccgaaattttcattggctgtcacggaggcgtttgtgcgattgcacgag
gacggactggtgtaccgccggcggaaacttgtcaactggtcgtgcgcactgaggtctacg
atctcagatattgaggtagagagtagagcactgtcaggccgtacgtacctctctgttcca
ggttaccaggagaagattccctttgggctcatggtgacctttgcctacaaggtggacggc
gaagaccaagaggtttgtgttgctacaacacgacctgagaccatgttgggagacgtcgca
gttgctgtccatcctgaggactcccggtatctggggttccacggtaagcggctccggcac
cccttcactgaccgccttctgcccatcattaccgactgcctggtggatccagaagtgggg
acaggtgcagtaaaggttaccccaggtcacagtcctgtggaccatgagctgggcttggcc
catggattgccactcgtctcagtcatcggggaggatggggctatgatggccgagtgtgga
gattggctgcagggtgttggccggttccatgcacgcgacaaggtggtggccgctctgaga
caacaaggactctaccgaggcacaagagatcactccatgctgcttcccgtctgcagccgc
tccggtgatgtcgtggagtatcttttcaagagccagtggtttgtccgatgtgcagagatg
gccaaatctgcctcacaggctgtggactccggccgcctgcagatcatccccagtgtgcat
ggcaaggtctggaagaagtggctgtcggacatcagcgattggtgcgtctcccggcagctt
tggtggggtcatcaggttcctgcctacatggtttcagatttgcaatccagtaactcacca
caggatgagagtgaggccttctgggtggttgcacggtcagaagccgaggcgctgaagaaa
gccgctgagatgctggggaccccggaacaagacatcttacttaggagagatcccgatgtg
cttgacacctggttctcatccggcctcttcccctttgccatgttggggtggcctgagcag
acacaggacctgtcacagttctaccccaacagcctgctggagacgggaagtgacctcatc
ttcttctgggtggccaggatggtgatgctgggacagcagttaactggtcagctgcccttt
tcccaggtcttcctccactccatggtccgagacgcgcacggacggaaaatgagcaagtct
ttgggtaatgtgctggaccccctggatgtgatctcaggggtctccctgcagcgacttcac
gagaagcttcgtgacgggaacctggatccccgggaggtggctttggcggaggaaggccag
aggagggatttcccatctgggatcccagagtgtgggacggatgccctgaggtttgcgctg
tgttcccaccgagtccaaggcgatgaccttaacctcgacgtggctgccgtcctcagcatc
cgacacttctgcaacaaggtctggaattcgctgaagttcacgctggctgccctgggggag
gagttctcaccagtgcccctcggggagctgtctccgacctctcccatggatgtctggatc
tgcagccgcctctcgcagacagtcagtgactgcggccgtcacttcgcagactacgagctt
cactcagtcacctcagccattcacggcttctggctgcagaacttctgtgatgtttacttg
gaatcggtgaagccggtgctgagggccggggaccccccccgggtccgaggggtgcagcag
gtgctcttctggtgctcggaggtctccctccggctcctggcccccttcatgcccttcctg
gccgaggagctctggcagcggctgccccgccgcggcgatgcccccgcgcccagcatctgc
gtggcaccgtacccctgcggccagcagctggctcactggcgccagcctcgggtggagagc
gacctcctcttcgtgcaggacgtggtgcgtgccatccgtgccctcagggtggggtaccag
ctgagccgggcgcgccccgaggtgaccgtgatctgccccgaggagggcatggccaggatc
ctgcaggagtaccaggagccgctgcagaccctctccctctccgggaccctcagggttctc
ccgctggccggagagaggacccccgcccgctgcgctgttggggtcgtcaatgagcagtgt
cgggtctacctgagcctgcaggggctggtggaccctcagcaggagctcctcagactcgct
cctcgtcagcagaagctggagcggcagctgtgggagctgagggcgcggatggaggccgaa
ggttacagtgagaagcaccctcagagtgtccaggacgagcaccggcggaagatcatcgcc
ctggagacagaagctgctcgtctggcagaggtggcccagagtttccagaggctgttgtcg
gaaggagaggagactggagtgtag
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