KEGG   Pleurodeles waltl (Iberian ribbed newt): 138301711
Entry
138301711         CDS       T10800                                 
Symbol
TAF5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
pwl  Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:pwl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    138301711 (TAF5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pwl03021]
    138301711 (TAF5)
   03036 Chromosome and associated proteins [BR:pwl03036]
    138301711 (TAF5)
Transcription machinery [BR:pwl03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     138301711 (TAF5)
   Coactivators
    SAGA/TFTC/STAGA complex
     138301711 (TAF5)
Chromosome and associated proteins [BR:pwl03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     138301711 (TAF5)
    STAGA complex
     138301711 (TAF5)
    TFTC complex
     138301711 (TAF5)
    SAGA complex
     138301711 (TAF5)
    SLIK complex
     138301711 (TAF5)
SSDB
Motif
Pfam: Beta-prop_WDR5 WD40 Beta-prop_IFT122_1st Beta-prop_WDR3_1st Beta-prop_THOC3 WD40_Prp19 WD40_CDC20-Fz TFIID_NTD2 WD40_WDHD1_1st Beta-prop_WDR3_2nd WD40_Gbeta Beta-prop_CAF1B_HIR1 Beta-prop_WDR36-Utp21_2nd Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR90_POC16_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_VPS8 WDR55 NBCH_WD40 ANAPC4_WD40 Beta-prop_WDR75_1st WD40_MABP1-WDR62_1st DSE1_N Beta-prop_SCAP Beta-prop_Aladin Beta-prop_TEP1_C PAC11 WDR90_beta-prop_4th Beta-prop_RIG_2nd Beta-prop_WDR41 CFAP251_N Beta-prop_IFT140_1st Beta-prop_Vps41 Beta-prop_EIPR1 Beta-prop_DCAF4 Beta-prop_HPS5 WD40_RFWD3 Beta-prop_SPT8 ASA1 Beta-prop_WDR19_1st Beta-prop_NOL10_N WD_LRWD1 WD40_like Tricorn_2nd Beta-prop_Nup120_160 Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 DNAI3_WD RAB3GAP2_N CDK5RAP3 Beta-prop_ELP1_1st Beta-prop_WDR11_2nd Beta-prop_ACSF4
Other DBs
NCBI-GeneID: 138301711
NCBI-ProteinID: XP_069098327
LinkDB
Position
6:complement(824257000..824430171)
AA seq 835 aa
MPVEWTMAALPDEQQEVVAAAAAAAAAGAAGPPPPPPPSPGPVSAVFEPEVKSEVIGGED
TGPEGGAEVTGAGDKLSPDNAPPAPEPPDPETLRTVLEFLKKSNLREAERTLLRELNLPE
GSPSSSLGGEAGGAPEPTPPPPVKGLPVQQQSTGAAMWEIVHIQAAQCGKQIGTKLRATC
NLREAERTLLRELNLPEGSPSSSLGGEAGGAPEPTPPPPVKASSVNAENQPDVSAVLSAY
TQQGDPSKYETYYSGLKRFIESVLDCHRAELSQLFYPLFVHMYLELVYNQHEIEAKTFFD
KFHGDQECYYEDDLRVLASLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQERQ
NNQIWSIVQEHLYIDIFDGMPRSKQQIDAMVGSLAGEAKREANKAKVFFGLLKEPEIEVP
LDDEDEEGENEEGKPKKKKPKKDSLGSKSKKQDPNAPLQTRIPLPELKDSDKLDKIMNMK
EATKRVRLGPDCLPSICFYTFLNAYQGLTAVDITDDSSLMAGGFADSTVRVWSVTPKKLR
SVKNAQDLSLIDKESDDVLERIMDERTASELKILHGHSGPVYGTSFSPDRNYLLSSSEDG
TIRLWSLQTFTCLVGYKGHNYPVWDTQFSPFGYYFISGGHDRVARLWATDHYQPLRIFAG
HLADVTCTRFHPNCNYVATGSTDRTVRLWDVLNGNCVRIFTGHKGPVHSLAFSPNGKFLA
SGASDGRVLLWDIGHGLMISELKGHTDTVYALKFSKDGEILASGSMDNTVRLWDSTKAFE
DLETDDFTTSTGHINLLDNSHELLLGAYMTKSTPVIHLHFTRRNLLLAAGAYSPQ
NT seq 2508 nt   +upstreamnt  +downstreamnt
atgccggtagagtggaccatggcggcactgccggatgagcagcaggaggttgtggcggct
gcagccgctgctgctgcagccggggctgcggggccgccaccaccacctcccccctccccc
gggccagtgagtgctgtgtttgagccagaggtgaagtcagaggtcataggtggcgaagat
accgggcccgaaggaggcgcagaggtaactggagcgggcgacaagctgtctcccgacaac
gcaccccctgcgccggaacccccggaccctgaaaccctgcgcactgttctagagtttctc
aagaaaagcaacctgcgagaggccgagaggactcttcttcgcgagctgaaccttccggag
ggctcacccagctctagtttgggtggagaggcgggtggggcacctgagccaacaccccca
ccccctgtcaaagggctcccagtgcaacagcagagtacaggcgcagccatgtgggaaata
gtgcacattcaggccgcccagtgcggcaaacagattggaacaaagctccgagctacctgc
aacctgcgagaggccgagaggactcttcttcgcgagctgaaccttccggagggctcaccc
agctctagtttgggtggagaggcgggtggggcacctgagccaacacccccaccccctgtc
aaagcttctagtgtgaatgcagagaaccagccagacgtgagtgcagtgctgtctgcgtac
actcagcaaggcgatccttccaaatatgaaacatactacagtgggctgaagcgtttcatc
gaatctgtcctggattgtcatcgtgctgagctctctcaactcttctaccctctctttgtg
cacatgtatttggagttggtgtataaccagcatgaaattgaagcaaaaacattttttgac
aagtttcatggcgatcaagagtgttactatgaagatgacctgcgtgtccttgccagcctt
acaaaaaaagaacatatgaagggcaatgagaccatgcttgatttccggactagcaaattt
gttttaaggatttcacgggactcttatcagctcctaaagaggcatctccaggagcgtcaa
aacaatcagatctggagcattgtgcaggagcatctctacatcgacatcttcgatggaatg
cctcgcagcaaacagcagattgatgccatggtggggagcttggctggagaggcgaagcgt
gaagctaataaagccaaggttttctttgggttattgaaagagccagagattgaggtgcct
ctggatgatgaagacgaagaaggtgaaaatgaagaaggcaaaccaaagaagaaaaagcca
aaaaaagatagtttgggatcaaaaagcaagaagcaagaccctaatgctcctcttcaaaca
aggattcctcttccagagctgaaggattcagataaactagacaaaataatgaacatgaaa
gaagccaccaagcgtgtacgcctgggtcctgactgcctgccatccatctgtttctacaca
tttctcaacgcgtatcagggtctaactgctgtggacatcaccgatgactccagcctaatg
gccggaggctttgctgactcaactgttcgtgtgtggtctgtgaccccaaagaagctacgc
agtgtaaaaaatgcacaagatctcagccttatagacaaagaatcagatgatgtattagag
agaataatggatgagaggacagcaagtgagttgaagattttacacggccacagtggtcct
gtttatggcaccagcttcagtcctgatagaaattacttgttgtcgagttcagaagatggt
acaatccgattgtggagcctgcagactttcacctgcttggtgggctacaaaggtcacaat
tacccggtgtgggatacacagttctctccctttggctactacttcatatctggaggccat
gaccgggttgctcgcttatgggccacagaccactatcagcctttaaggatatttgctggc
catcttgcagatgtcacttgcactcggtttcatccaaactgtaattatgtggcaacaggc
tcaactgacaggactgtcaggctttgggatgttttgaatggaaactgtgtaaggattttc
actggccacaagggacctgttcactcattggccttttctccaaatggtaaatttctggcc
agcggtgcgtcagatgggagagtgcttctgtgggacattggacatggcctgatgatttcc
gagctaaaggggcacacagacacagtctatgcattgaaattcagtaaagatggagaaatt
ttagcatcaggttcaatggataatacagtacgcctatgggactcgacaaaagcattcgaa
gatttggaaactgatgattttaccacttcaacaggacacataaacctacttgacaattcg
catgagttgttgctgggtgcatacatgaccaaatcaacgcctgtaatacatctccacttc
acccgtagaaacttactcctcgctgctggagcatatagtccacagtga

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