Pleurodeles waltl (Iberian ribbed newt): 138301755
Help
Entry
138301755 CDS
T10800
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
Glycosaminoglycan binding proteins [BR:
pwl00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
138301755 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
138301755
NCBI-ProteinID:
XP_069098367
LinkDB
All DBs
Position
6:1247179720..1247830614
Genome browser
AA seq
665 aa
AA seq
DB search
MAVILHKKRDFNESLEEFRIPSKPVNENVIDEEQVGLQLPGLPGPSGRPGLPGAPGEPGM
SIIGPRGPPGQPGARGFPGFPGPIGLDGKPGHPGQKGEKGEMGPSGSKGQLGMAGQKGEK
GQCGDYTHRLLPLLNAVRVAQPSVIKRRIYQGEQGQAGIQGPPGVPGPPGPSGPPGNPGV
PGLTGQPGKSGEPGKPGKDGKGLPGLPGPKGEEGEAGLPGAAGLPGPAGAKGDKGDPGLK
GERGMPGIPGKHGLKGVPGTAVAGVKGEPGEPGKPGPLGQKGEKGETGNAVGGVKGEPGP
PGPPGSPGPKGEVGDIGQPGTAGPQGEKGEPGVLGEQGAAGPRGPKGEPGKPPEQMEYNG
NINEALQEIRTLALMGPPGLPGPPGPAGLPGVPGQKGDIGLPGVPGHDGEKGPRGKPGEA
GPPGPQGPSGEDGRPGIKGETGIMGFPGPKGDKGAAGLTGSPGLDGPTGEKGAQGDQGIS
GPPGLPGPIGLPGLTGDKGEPGEKGSPGESVVGPAGKPGADGASGPAGPPGLPGPKGEAG
LDGVKGEKGDQGEKGDRGPLGLPGASGFDGRPGPPGNPGPIGVPGPAGPKGEQGNKGDQG
TIGPTGPAGPPGAQGPPSEKGSRGERGKKGSRGPKGDKGDQGAPGLDAPCPLGEDGLPVQ
GCWNK
NT seq
1998 nt
NT seq
+upstream
nt +downstream
nt
atggctgtgattctccacaagaagagagattttaatgaatccctagaagaatttagaatt
ccttcaaagccagtaaatgaaaacgtcattgacgaagagcaggtggggttacagttacca
ggactgccaggcccatctggaagacctggcctaccaggagccccaggagaacctggcatg
tccatcataggaccccgtgggccccctggccagcctggagcaagagggtttccgggattt
cctggtccaattggattagatggtaaaccaggtcaccctggacagaaaggagagaaggga
gagatgggtccttctggttccaaaggacagttaggaatggcagggcaaaaaggagaaaag
ggtcagtgcggggattacacgcacaggttgttgccacttctcaatgcagtgcgggtggct
cagccttcggtcataaaaagacgcatctaccagggtgaacaggggcaagcgggcattcaa
ggcccaccaggtgtgcccggacccccagggccatctggacccccaggaaaccccggtgtg
cctggtctaactggacaacccggtaaatctggcgagcctggaaagcccgggaaggatggc
aagggcttacctgggcttccaggaccaaagggagaggagggcgaggctgggttacctggt
gcagcaggccttcccggacctgcgggcgcaaagggagataagggggatcctggattgaag
ggcgagaggggcatgccagggattccaggaaaacatggattgaagggcgttcctggaaca
gcagttgcaggagttaagggggagcccggggagcctggcaaaccagggcctctaggacaa
aagggagaaaagggagagactggaaatgcagttggtggagttaaaggggagcctggccct
cccgggcctcctgggtccccgggaccaaagggagaagttggtgatattggccagcctgga
actgcaggaccgcaaggggaaaagggagagcccggagtgcttggagaacagggagcagct
gggcccagggggcccaaaggtgagccagggaagccgccagagcagatggaatacaatggt
aacatcaacgaggcattgcaagaaatccgaacattggcccttatggggccacctggacta
ccaggacctcctgggccagctggccttccaggagtacctggacaaaagggagacattggt
ttgcctggtgtgcctggtcatgatggagaaaagggtccacgaggcaagccaggagaagct
ggtcctcctggtccacaaggaccctctggagaagacggacgtcctggaatcaagggtgag
actggaattatgggttttccaggaccgaagggagataaaggagcagctggactgaccgga
tctccaggtcttgatgggccaactggcgagaaaggagcgcaaggtgatcagggaatatca
ggcccaccaggactaccaggaccaattggacttccaggacttacaggagacaagggagaa
cctggagagaaaggaagcccaggggagtcggtggtaggaccagctggaaaaccaggggca
gatggagcatcaggacctgcgggtcctcctggccttcctggaccaaagggagaagcagga
cttgatggtgtgaaaggagaaaagggtgaccagggtgaaaagggagaccgaggtccactt
gggttgcctggtgcttcaggttttgacggcaggcctgggccaccgggcaacccaggacca
attggagtgccaggacctgcgggaccgaaaggagagcagggaaataaaggagaccagggt
acaataggaccaactggaccggctggacctcctggtgcacaagggccacctagtgaaaag
ggaagccggggggagagggggaagaaaggctctagagggcctaaaggggataagggagac
caaggagcgcctggattagatgcaccatgtcctttgggtgaagatgggttgccagtacaa
gggtgctggaataagtga
DBGET
integrated database retrieval system
