Pleurodeles waltl (Iberian ribbed newt): 138301762
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Entry
138301762 CDS
T10800
Symbol
TMC1
Name
(RefSeq) transmembrane channel-like protein 1
KO
K21988
transmembrane channel-like protein
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwl02000
]
138301762 (TMC1)
03037 Cilium and associated proteins [BR:
pwl03037
]
138301762 (TMC1)
Transporters [BR:
pwl02000
]
Other transporters
Pores ion channels [TC:
1
]
138301762 (TMC1)
Cilium and associated proteins [BR:
pwl03037
]
Other cilia and associated proteins
Stereociliary proteins
138301762 (TMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
SH3_11
Med28
Motif
Other DBs
NCBI-GeneID:
138301762
NCBI-ProteinID:
XP_069098389
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Position
1_1:836151979..836524498
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AA seq
886 aa
AA seq
DB search
MALATGERAPPFTKEELTKLVDGILPLYAKLYGRPEEQLQQFLDDNSSASAATIGIMDLP
TTFTGWIPKVRDLVHEKIAVKKEFGPSYRALVQVLRIQGTRTVILPPLPGSKANIFVSID
NIKLNHVAILHSRHRGRLGSSWYPLTTQQDIPLQRRNNTSDYNSMYNNATNASSSMGRLE
NELLLISVTTSTTTNVQDVSVFYSNTTQTDDIVYYEPPHEVDPSTSNVPARVSDSESEED
EITEEEMDKLKEAVEEKKKLIATIRNKPWKMKQKLEVLKDAQLFVEKFEGALGKGKGKQF
YAYKVMMMKKWMKFQRDFENFKTACIPWEMKIKEIESHFGSSVASYFIFLRWMYGINMIL
FGLTFGLVMVPEALMGKPYGSIPRKTVPRAEEASAMNFATLWDFSGYAQYSVLFYGYYNN
VRTVGWLQFRLPLSYLLVGLGTLAYSFMVVIRTMAKNANDEGGGDDNSFNFSWKMYTSWD
YLIGNPETADNKFASITTSFKESILEEQENRKEENIHLTRFLRVLANFLALCTLAGSGYL
IYFVVRRSQKFALEGLENYGWWERNEVNMVMSLLGMFCPTLFDVISGLENYHPRIALRWQ
LGRIFALFLGNLYTFLIALMDEINLKREEEKIVMYNMTLWEASLYNGTVSGNSTAPPIQV
DPADVPRGPCWETMVGQEFVRLTVSDIMTTYITILAGDFLQAVFVRFFNYCWCWDLEYGW
PSYCEFDISGNVLGLIFNQGMIWMGSFYAPCLPAINVLRLHTSMYLQCWAVMCCNVPHAR
VFKASRSNNFYMAMLLFILFLSMLPVVYTIVSIPPSFDCGPFSGKEKMFAAITETLENDF
PAWFGKVFSYASNPGLILPFILIMMYVLPEPFVIVLHRRYHRRLSH
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcacttgcaacaggggagagggccccacccttcaccaaggaggagctgaccaagctt
gtggacgggatcctacccctgtatgccaagttgtatgggcgaccagaggagcagcttcag
caatttcttgatgataattcatccgccagtgctgccaccataggaataatggatttgcca
acaacttttactggctggattcctaaagtcagggatctggttcatgagaagattgcagtg
aagaaggaattcggcccatcctacagagcactagtccaagtcctccgaatacaaggtacc
agaactgtcatcctaccaccactgcctggttccaaagcaaacatatttgtctcaattgac
aacatcaaacttaaccatgtggcgatcctgcacagtagacacagaggtcgcttgggtagt
tcctggtaccctctaactacccaacaggacatacctcttcaaagaagaaacaatacttct
gactacaacagcatgtacaacaatgctacgaatgcctcctcgagcatgggaaggctggaa
aatgaacttttgctgatttctgttaccacttctacgacaacaaatgtccaagatgtgtct
gtcttctactccaacaccacacaaactgatgacatcgtctactatgagcctccacatgaa
gtggatccatccaccagtaatgtaccggctcgtgtttcggactctgaatctgaggaagat
gaaattacagaggaagaaatggacaagttaaaagaagcagtggaagagaagaagaaattg
attgcaacaataagaaataaaccatggaagatgaagcagaaactggaagtcctcaaggat
gctcagctttttgttgaaaaatttgaaggtgccctcggtaaagggaaggggaaacagttt
tatgcgtacaaagtgatgatgatgaaaaaatggatgaagtttcaacgagattttgaaaat
tttaagaccgcctgcattccatgggaaatgaaaatcaaggaaattgaaagccattttggc
tcttcagttgcatcatactttatatttcttcgttggatgtatgggatcaacatgatactt
tttggactgacctttgggcttgttatggttcctgaggcattaatgggaaaaccatatgga
tctattcccagaaaaactgtgccgcgagctgaagaagcaagtgctatgaactttgccaca
ttatgggactttagtggttatgcacaatactctgtcctgttctacggatattacaacaat
gtaaggacagttggctggcttcagttccgcttacccctctcctatcttctagtgggactt
ggaactcttgcttatagtttcatggtggtaatcagaacgatggcgaaaaacgcaaatgat
gaaggtggcggggatgacaacagttttaatttcagctggaaaatgtatacaagttgggat
tacttgattggcaatccagaaactgctgacaacaagtttgcatcaatcacaactagcttt
aaggaatctattttagaagagcaagagaaccgtaaagaagaaaatatccatttaacacga
ttcttgcgagtgctggctaattttctagcactctgcacccttgctggaagtgggtaccta
atttactttgttgtgaggcgatcccaaaaatttgcactggaaggactggagaactacgga
tggtgggaacgaaatgaggttaacatggttatgtcgctcctgggtatgttttgtccaact
ttatttgatgtgattagcggtttggaaaactatcatcctagaatagcactgagatggcaa
ttggggcgcatctttgctctgtttttgggaaacctgtacacattcctaattgccctgatg
gacgaaattaatctgaagcgagaagaagaaaagatagtgatgtataatatgactttatgg
gaagcaagtttgtacaatggaacagtttctggaaactccaccgctcccccaattcaagtg
gatccggccgacgttccaagaggaccctgctgggagacaatggttgggcaggaatttgta
cgcctgacggtatccgacataatgactacatacattaccattcttgctggagatttcctg
caagctgtttttgtccgttttttcaattattgttggtgctgggatctggaatatggatgg
ccttcttactgtgaatttgatatcagtggcaatgttcttggattaatcttcaaccagggc
atgatctggatgggttccttctacgcgccgtgcctccctgctatcaacgtcctccgtctc
cacacctctatgtacttgcagtgctgggccgtcatgtgctgcaatgttcctcacgcacga
gtgtttaaggcgtccaggtccaacaacttttacatggcaatgctgcttttcatcctcttt
ttgtccatgctgcccgttgtctacacgatcgtctcaattccaccgtctttcgactgcggt
ccattcagcgggaaagaaaaaatgtttgcagcgattacagaaaccttggagaacgacttc
ccggcttggtttggaaaggtttttagctacgcatcaaatccagggctgattctgcctttc
attctgataatgatgtatgtattgccagaaccttttgttattgtactgcacagacgttat
cacagacgtctctcacactga
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