Pleurodeles waltl (Iberian ribbed newt): 138303564
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Entry
138303564 CDS
T10800
Name
(RefSeq) transient receptor potential cation channel subfamily V member 6-like isoform X1
KO
K04975
transient receptor potential cation channel subfamily V member 6
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pwl04040
]
138303564
Ion channels [BR:
pwl04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
138303564
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ion_trans
Motif
Other DBs
NCBI-GeneID:
138303564
NCBI-ProteinID:
XP_069098923
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Position
7:17309010..17401913
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AA seq
719 aa
AA seq
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MFSNLWNRMTSCFRRSEPREPEPHEINLLQQKRIGELPLFLAAKKNKVRAISVFLNSKSC
DPFQKGALGETALHVAVQYNNLEAVMTLLDTAPALLNMPMTSTSHDGLTALHIAVVNQNV
NMVKELVRRGADVSAPRATGTFFKHGRQKHFYFGEHILFFAACVENKEIVQLIIESGADI
RVQDSLGNTVLHILTLQPYKIFACQIYDIIQSYDKGCLDQTVNHKGLTPFKMAAYEGNTV
MFQHLMQKRKQVQWALGPITCTLYDLTEIDLWGEHQSVLELVTSSKKKEASQILHLTPVK
ELVNLKWQHYGRPYFCILAAIYVAYMVCVSLCCVNRPLKHKALNPNNSKDITIFAQETLE
KSYVSSSDHLRLAGEIISVTGAIIILLLKIPDLFQISDLRYFVQAVQGGPFSITSVSFAC
LVLAILIMRLTGCDGEVIPMSGALVLGWCYVMYFARGFQMLGPFTIMLHKMIFGDLLRFC
WLMAVVILGFATAFYIIFQTEDSSMLGEFQSYPMALFSTFELFLNVINSPTNYDVDIPNI
FYVIYFAFTIIANLLMLNLIIAMMGDTHWRVAQEMDELWRTQVVAASVMLERKIPHCLWT
RSGICGKAYGLGDRWYLRIIDRKDHTKQKMQRYVDAFQMQEGENSEKTTEKSEKHREKDS
PTQQRPTDPRPSSTLHVPENITQRKQSKGWERLKSATLEELQGKANKAVGLDEHEIHHV
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaaacctctggaatagaatgaccagctgcttcagaagatcagaaccccgggag
cctgaaccccacgagatcaaccttctccagcagaaaaggattggggaattaccactgttt
ctagctgccaagaagaacaaagtgagagccatctctgtgttcctgaactccaagtcctgc
gaccctttccagaaaggtgcacttggcgagacggcgctccatgttgctgtgcagtacaat
aacttggaggctgtgatgaccctcttagacacagcacctgccctcctcaacatgccaatg
acatcaacgtcacatgatggtctgactgccctccacattgcggtggtgaaccagaacgtg
aacatggtaaaggagcttgttagaagaggggccgatgtgtcagccccgcgagccacaggg
accttcttcaaacatgggcgacaaaaacatttctattttggggagcacatactgttcttt
gcagcctgtgtggaaaataaagaaattgtacaactgattattgaaagtggagcagatatt
cgagtacaggattccctagggaacaccgttctccatatactgactttacagccctacaaa
atatttgcgtgccagatctatgacatcattcagtcttacgacaaaggatgcctggaccag
acggtgaaccacaaagggctcaccccattcaagatggctgcttatgagggcaacaccgtg
atgttccagcacctgatgcagaagaggaagcaggtgcagtgggctttgggccccatcaca
tgcaccctgtatgacctcacagaaattgacctgtggggggaacatcagtcggtcttggag
cttgtgacatcctcaaaaaagaaagaggctagtcagatcttgcacctgaccccggtaaag
gagctggtgaacctgaagtggcagcactacggacgtccctacttttgcatcctggctgcc
atctatgtggcttacatggtctgcgtctccctgtgttgtgttaatcggcctctaaagcac
aaagcgctcaatcccaacaactcaaaagacataacaatctttgctcaagaaaccctagag
aaatcatacgtctctagcagcgaccacctgaggctggctggagaaattatcagtgttact
ggggcaatcatcattcttctcctaaagattccagatctcttccagatcagtgatcttagg
tactttgtgcaggccgtgcagggagggcctttcagtattaccagcgtgagctttgcttgt
ctggtactcgcaatcctgataatgcgactcacgggctgtgacggagaggtgatccccatg
tctggtgcccttgtcctgggatggtgctatgttatgtactttgcacgtggatttcagatg
cttggacctttcaccatcatgctacacaagatgatattcggcgacctcttgcgtttctgt
tggcttatggcagtagtgattttgggctttgctacagccttctacatcattttccagacg
gaagactcaagcatgctgggagaattccaaagctacccaatggcgctcttcagcaccttc
gagctcttcctgaacgtcatcaactctccgaccaattacgatgtggacattcccaacata
ttctacgtcatctacttcgccttcaccatcatcgccaacctgctgatgctcaatctgatc
atcgccatgatgggcgacactcactggcgcgtggcgcaggagatggacgagctctggaga
acacaggtggttgctgcttcagttatgcttgagcgtaaaatcccccactgtctctggact
cgctcaggtatatgcgggaaagcgtatggtctaggggacagatggtacctaagaatcatt
gatcgaaaagaccacactaaacagaaaatgcagcgttatgtggatgcttttcagatgcag
gaaggagaaaactcagaaaaaactactgaaaagtcagaaaaacatagagagaaagacagt
ccaacacaacaacgaccaacagatcctcgtcccagttccacgctgcatgtgcctgagaac
attacccagcgaaaacaaagcaaaggctgggaacgtctgaagtctgccaccctagaggaa
cttcaggggaaggccaacaaggcagtggggttggatgaacatgagattcaccatgtctga
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