Pleurodeles waltl (Iberian ribbed newt): 138304095
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Entry
138304095 CDS
T10800
Symbol
SDC4
Name
(RefSeq) syndecan-4
KO
K16338
syndecan 4
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04512
ECM-receptor interaction
pwl04514
Cell adhesion molecule (CAM) interaction
pwl04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
138304095 (SDC4)
04514 Cell adhesion molecule (CAM) interaction
138304095 (SDC4)
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
138304095 (SDC4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pwl00535
]
138304095 (SDC4)
Proteoglycans [BR:
pwl00535
]
Cell surface proteoglycans
Syndecan family (transmembrane HSPG)
138304095 (SDC4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Syndecan
TM_ErbB1
Ycf70
Motif
Other DBs
NCBI-GeneID:
138304095
NCBI-ProteinID:
XP_069099931
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All DBs
Position
7:complement(378453466..378482260)
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AA seq
198 aa
AA seq
DB search
MWRLLALCAILAAVGAESVRETAIMKPAGDIFSGSLPDDEDQSIDIGDFDRDEDIDDDDD
YDYPSGSGDGEISNKDESSSVLPDFPTDNRIPDGDARKPKQENIDDELVQLNEVSPDRSA
PVSGDSSNEIPMAITGNESFFQKTEVIIALIAGGVVGLLFAVFLILLLYFRMKKKDEGTY
DLGKKPIYKKAPTNEFYA
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgtggcgacttctggcactgtgcgccatcctggcggccgttggcgccgaatcggtaaga
gagactgcaatcatgaaacctgcaggagatatattttctggctccttaccggatgatgag
gatcagagcattgatattggggactttgatcgtgatgaggatatcgatgatgacgatgac
tatgattacccatcaggctccggagatggtgaaatttcaaataaagatgaatcttcttcg
gtgttacccgattttcctactgacaaccgcattcctgacggtgatgcaagaaagccaaag
caggagaatattgatgatgaactggtgcaacttaacgaagtgtccccagataggtctgct
cctgtgtcaggagactcctctaatgagatcccaatggcaattaccgggaatgaaagcttc
tttcaaaagacagaagtcatcatcgctctcatcgccggtggagttgtcggtctgctcttt
gcggttttccttatcctcctcctgtatttccgcatgaagaaaaaggacgaaggcacctac
gaccttggaaagaagccaatctacaagaaggcgcctacaaacgagttctatgcatag
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