Pleurodeles waltl (Iberian ribbed newt): 138304183
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Entry
138304183 CDS
T10800
Name
(RefSeq) coronin-1A-like isoform X1
KO
K13882
coronin-1A
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
138304183
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pwl04131
]
138304183
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pwl04812
]
138304183
04147 Exosome [BR:
pwl04147
]
138304183
Membrane trafficking [BR:
pwl04131
]
Endocytosis
Phagocytosis
Coronins
138304183
Cytoskeleton proteins [BR:
pwl04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
138304183
Exosome [BR:
pwl04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
138304183
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1899
Beta-prop_THOC3
Beta-prop_WDR5
WD40_4
WD40
Beta-prop_IFT122_1st
WD40_Prp19
WD40_CDC20-Fz
Beta-prop_WDR3_1st
Beta-prop_CAF1B_HIR1
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR3_2nd
Beta-prop_TEP1_2nd
Trimer_CC
DSE1_N
EIF3I
WD40_Gbeta
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR35_TULP_N
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EIPR1
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR75_1st
PAC11
Beta-prop_IFT140_1st
WD40_MABP1-WDR62_2nd
eIF2A
ASA1
NBCH_WD40
WD40_RFWD3
Beta-prop_WDR19_1st
Beta-prop_WDR41
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
TRM82_WD
Beta-prop_HPS5
CEP209_CC5
Beta-prop_DCAF12
CFAP251_N
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
138304183
NCBI-ProteinID:
XP_069100126
LinkDB
All DBs
Position
7:complement(456044634..456199383)
Genome browser
AA seq
471 aa
AA seq
DB search
MDGRQERATMSRKVVRTSKFRHVYGQAVKADQCYDDIRISQTTWDSNFCTVNPKFVAMIV
EASGGGAFMVLPLSKTGRLDKSQPLVCGHTGPVLDIEWCPHNDNVIASGSEDCSVMVWEV
PDGGLTRSITEPIVTLEGHSKRVGIISWHPTAQNILLSAGCDNVIIIWNVGKGEAVITLD
ETHPDMIYSVSWNYDGSLFCTSCKDKKIRVIDPRNNKIVAEKDKPHEGSRPVRTIFVSDG
KIFTTGFSRMSERQVALWDPKNFDEALTLQELDTSSGVLIPFFDPDTGIVYLCGKGDSSI
RYFEITDEAPYVHYLSMYSSKESQRGMGYMPKRGLEINKCEIARFYKLHERKCEPIAMTV
PRKSDLFQEDLYPDTVGPDPAMDADEWLGGKNANPILISLKDGYVPSKSRELKVTKNILD
IKGPRRSHSSNEAGFSKDPALEKLTEEIRLLKATVKEQDRRISELEEQVSK
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atggacggaaggcaagaaagagccacgatgagccggaaggttgtgcgcacaagtaagttc
cgccatgtgtatgggcaagcagtaaaggctgaccagtgctatgacgacatcaggatctca
cagacgacgtgggacagtaacttctgtaccgttaacccaaagtttgtggccatgattgtt
gaagctagtggcggaggagcctttatggtcttaccattgtcaaagacaggacgcctggat
aaatcgcagcctctggtgtgcggccacacaggcccagtacttgacattgagtggtgcccc
cacaatgacaacgtcatcgccagtggttcagaggactgcagcgtcatggtttgggaagtt
ccagatggcggactgacgcgctctattacagagcccatagtgaccctggagggtcactcc
aagcgagtgggtattatctcatggcaccccacggcccagaacatcttgctgagcgcaggc
tgtgataatgtgatcatcatctggaacgtggggaagggagaagctgtcatcactttagat
gagacccacccagacatgatctacagtgtgagctggaactatgacgggagcctcttctgc
acttcctgcaaggacaaaaagatccgggtgatcgacccacgcaacaacaagatagtggcg
gagaaagataaaccacacgaaggcagccgaccagtgcgtaccatctttgtttctgacggc
aagatttttacaacaggattcagccggatgagcgagcggcaagtggctctttgggatccg
aaaaacttcgatgaagcgctgacgctacaggagctggacaccagtagtggagtgcttatc
cctttttttgacccagacactggcatcgtctacctctgtggaaagggggacagtagtata
cggtactttgagatcacagacgaagccccttatgtgcactacctgtccatgtatagcagc
aaggagtcacagaggggtatgggatacatgccaaagaggggcctggagatcaacaagtgt
gagatagccagattttacaaattacacgagaggaaatgtgaaccaattgcaatgacagtg
ccgagaaagtcagaccttttccaagaggacctctatcccgatactgttggcccggaccct
gccatggacgcagatgagtggctcggagggaaaaatgccaatcccatcctcatctccctc
aaggacggatatgtgccaagcaagagccgtgagctgaaagttaccaagaacattctggat
atcaaaggaccacgcaggagccattcatctaatgaagctgggttctccaaggatccggcc
ttggaaaagctgactgaggaaattaggctgctgaaggccacagtgaaggaacaggaccga
cgcatctcagagttggaggaacaagtcagcaaatag
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