Pleurodeles waltl (Iberian ribbed newt): 138304388
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Entry
138304388 CDS
T10800
Symbol
RNF40
Name
(RefSeq) E3 ubiquitin-protein ligase BRE1B isoform X1
KO
K10696
E3 ubiquitin-protein ligase BRE1 [EC:
2.3.2.27
]
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pwl04121
]
138304388 (RNF40)
Enzymes [BR:
pwl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
138304388 (RNF40)
Ubiquitin system [BR:
pwl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
BRE1 proteins
138304388 (RNF40)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRE1B
CC_Bre1
zf-C3HC4
zf-C3HC4_3
zf-C3HC4_2
zf-RING_5
zf-RING_2
zf-rbx1
zf-RING_UBOX
DUF2844
Motif
Other DBs
NCBI-GeneID:
138304388
NCBI-ProteinID:
XP_069100486
LinkDB
All DBs
Position
7:complement(576738261..576977662)
Genome browser
AA seq
1146 aa
AA seq
DB search
MSGPGSKRAAGDSGSGPSEKKANREEKTTTTLIEPIRLGGISSTEEMDLKVLQFKNKKLA
ERLEQRQAFEDELRERIEKLEKRQATDDATLLIVNRYWTQLDENVQSLLQSYDTDCSSSV
DASSAGGEFPGTEDQNQLPVLAEAEEPRKTEEPDHPERPGVDAVSLTPSSSVPEKSDGDM
NDTTLSFLETLASSSNEEMELQIQGRMEFSKKAVSRIVEASNKLHRRIEDLCQKIHSGTS
YEHLDEQVKSLNKDLCTENRRLQDLATQLQEKHHRISLQYNELQDKVCSSETKVSEMETT
IEDLQWDIEKLRKREQKLNKHLAEALEQLNSGSHVSGSSGSFQGGQITLTMQKFEMLNTE
LEENQELANSRIAELEKLQNELQTAVRLKEKLKMDLRNIPEDLVKDTQEYKCLQSQFSLL
YNESLQVKTQLDEVRALLLTTKNSHLRQIEHMESDELGLQKKLRTEVIQLEDTLAQVRKE
YEMLRIEFEQNLAANEQAGLPFPVSFTGPINREMRHLIGSLQNHNHQLKGDVQRYKRKLR
EAQAEMNKIRVQMSGYPTGSTSLPSTPGEEGPPAVVKEEEMAEVKNENKDSCAKEKEETV
SRECKKEEEEIKREPERPKGRDRERENDKDKEGGRERERDRDQHRERDRDRERDRDRDKD
RDREKEREKDRDKDREKDRDKDREKDREKDREKDRDKERDKDREKDRDKDREKDRDKDRE
KDRDKDREKDRDKDREKDREKDRDKDREKDRDKDREKDREKEREKERDKDRDKDRDRDRD
KDKQKTDESKKKDSDVLKQLRSELKKAQESQKEMKLLLDMYKSAPKEQRDKVQLMAAEKK
TKAEVEELRSRIRDLEEKEKRESKKMADEDALRKIKVAEEQIDHLQKKLGATKQEEEALL
SEMDVTGQAFEDMQEQNMRLMQQLREKDDANFKLMSERIKSNQIHKLLREEKDELADQVL
ALKSQVDSQLLVVQKLEEKERVLQGNLCSIEKELTLRTQALELNKRKAVEAAQLSEDLKV
QLEHVQCRLKEIQTFMSENRTAKEKESFNLKRAQEDISRIRRKLEKQKKVEVYADADEIL
QEEIKEYKAKLTCPCCNTRKKDAVLTKCFHVFCFECVKTRYDTRQRKCPKCNAAFGAHDF
HRIYIS
NT seq
3441 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggcccagggagtaagcgggccgctggggatagtggctctggaccctccgagaag
aaagccaaccgtgaagagaagaccaccacaacactgatcgagcctatccgattaggaggc
atttcttccacggaggagatggacctcaaggttcttcagttcaagaacaagaagttggca
gaacgtctggagcagcggcaggcatttgaggatgagctacgggagcgcattgagaaattg
gagaagcgtcaggccacagatgatgccacactccttattgtgaatcgatattggacccag
ttggatgaaaacgtacaaagcttgctacagtcctatgatacagactgtagctcttctgtg
gatgcttcctctgctggtggggaattcccaggtacggaggatcaaaaccagctgccagtt
ctagcagaggcagaagaaccaagaaagacggaagagccagatcaccctgaaagaccaggt
gtagatgcagtttctctgacgccctcctcttctgtgccagagaagtctgatggggacatg
aacgataccactctgtctttcctggagactttggctagcagcagcaatgaggagatggag
ctgcagatccagggtcgcatggagttctcaaaaaaggcagtgtcacgcattgtggaggct
tcaaacaagttgcatcggaggatagaggatctctgtcagaagatccacagtggaaccagc
tacgagcacctggatgagcaggtgaagtctctgaacaaggacttgtgcacagaaaacaga
cggctgcaggacctggcaacacaactgcaggagaagcatcaccggatctcgctgcagtac
aatgagcttcaagacaaagtgtgctcgtcagagaccaaagtgtctgagatggagacgacg
atcgaagacttgcagtgggacatcgagaaactgcgcaaaagggagcagaaacttaacaag
cacctagcagaagcactggagcagctgaactctggatcccatgtctcaggaagttctggc
agcttccagggcggacagatcacactcactatgcagaagtttgagatgttgaacacagag
ctggaggaaaaccaggagttagccaacagccggatagcagagctggaaaagctgcagaat
gagctacagacagctgtgcgattgaaagaaaaactgaagatggacctgcggaacatccca
gaagacttggtgaaggacacacaggagtacaagtgcctacagtcacagttctccctactc
tacaatgagtccctccaggtgaagacccagttggatgaggtgcgggccttgctactaacc
actaagaacagccacctgcgtcaaattgaacacatggagagcgatgagttggggttgcag
aagaagctgcgtacagaggtaatccagctagaggacacactggcacaagtcaggaaggag
tatgagatgctgcgcatcgaatttgagcagaacctggcagccaatgagcaagcaggtctc
ccctttcctgtctctttcacaggtccaataaatcgagaaatgcgacacctgattggaagt
cttcagaatcacaatcaccagttgaagggagatgtgcaacgatacaaaagaaagctgcgt
gaagcccaggctgagatgaacaagataagggttcaaatgagtgggtaccccacaggctca
acttcactcccatccactcctggggaagagggccctcctgctgtagtaaaggaggaggaa
atggcagaggtgaagaatgagaacaaagactcatgcgccaaagaaaaagaggagactgtg
tctcgagagtgcaagaaggaggaagaggagattaagcgtgaacctgaaaggcctaaggga
cgagacagggagcgggagaatgataaagacaaagaaggaggaagggagagggagcgagat
cgggatcagcatcgggagagagaccgtgatagagagagggatagagacagagacaaggac
cgagatagggaaaaggagagggagaaggaccgtgataaagatcgtgaaaaagacagggat
aaagatcgggaaaaggatcgggagaaagacagggagaaggacagggacaaagaaagagat
aaagatagggaaaaggacagagataaagatagggagaaggaccgggataaagaccgagag
aaggaccgagataaagacagagagaaggaccgggataaagaccgagagaaggatcgagag
aaggaccgagataaagaccgagagaaggaccgggataaagaccgagagaaggatagggaa
aaagaacgggagaaggaaagggataaggacagagataaggaccgggacagagaccgagac
aaagacaaacagaagactgatgagtccaagaagaaggattctgatgtgctgaaacaacta
cggtctgagttgaaaaaggcccaggagagtcagaaggagatgaaattgctgctcgacatg
tataaatccgcccccaaagaacaaagggacaaggtgcagctgatggcagctgagaagaaa
accaaggctgaggtagaagagctgcggtcaagaatacgagacttggaggagaaggagaaa
cgagaaagcaaaaagatggctgatgaggatgcactgcgcaagatcaaggtagcagaggag
cagatagaccatcttcaaaagaagttaggtgccactaaacaggaggaagaggccttgctt
tcagagatggatgtgacaggtcaggcatttgaggacatgcaggagcagaatatgcggttg
atgcagcagctgcgtgagaaagacgatgccaacttcaagctcatgtccgagcgcatcaaa
tccaaccagattcacaagctgctgcgagaggagaaggatgagttggctgatcaggtgttg
gcccttaagtcacaggtggattctcagctgttggtggtgcagaagctggaagaaaaggag
cgtgttttacaggggaatctgtgttccatcgaaaaagagctgacattgcgcactcaagca
ctggagctcaataagaggaaggcagtagaagcggcacaactctcagaggacttgaaggtg
cagctggagcacgtacagtgcagactgaaagagattcagacgttcatgtctgagaaccgg
acagccaaagagaaggagtcttttaatctgaagagggcacaggaagatatatctcgtatt
aggcgtaagttggaaaagcagaagaaggttgaagtctatgctgatgctgatgaaatacta
caggaagagattaaagaatacaaggccaagctcacatgcccgtgctgtaatactcgcaag
aaggatgccgtcctcaccaagtgcttccacgttttctgctttgagtgcgtgaagactcgc
tatgatacacgccagcgcaagtgccctaagtgcaacgcagccttcggtgcacacgacttc
caccgcatctacatcagctga
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