Pleurodeles waltl (Iberian ribbed newt): 138304583
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Entry
138304583 CDS
T10800
Symbol
IRF1
Name
(RefSeq) interferon regulatory factor 1 isoform X1
KO
K09444
interferon regulatory factor 1
Organism
pwl Pleurodeles waltl (Iberian ribbed newt)
Pathway
pwl04625
C-type lectin receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
pwl00001
]
09150 Organismal Systems
09151 Immune system
04625 C-type lectin receptor signaling pathway
138304583 (IRF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pwl03000
]
138304583 (IRF1)
Transcription factors [BR:
pwl03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters interferon-regulating factors
138304583 (IRF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
IRF
DUF4901
Motif
Other DBs
NCBI-GeneID:
138304583
NCBI-ProteinID:
XP_069055288
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All DBs
Position
7:complement(713662158..713678679)
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AA seq
322 aa
AA seq
DB search
MAPTRMRMRPWLEMQINSEEIPGLCWLNKDEQIFQIPWKHAARHGWEMKKDACLFEKWAI
HTGRYKVGEKAPDPKTWKANFRCAMNSLPDIKEVKDKSINKGSSAVRVYQMLPAAAKTEL
KERRSRSCRDSKKKPPKMEFENNCSEHISDIVHISSIDEQGRYTDHSYSGQEMDVHSTST
GLPSAPTECDASSLAALGNGLQISIADSTNDLYPFQVSPSSSCTSATEEEEEEERALTED
LLKMTYPTASWHQTNVDGKGYLSNEAGVQFTDPSTRDLTAEFEKMAGEIELRFCTDMKTT
ADILSWLDPNYGSYLPAITCMY
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atggcacccacaagaatgcgcatgaggccttggctggaaatgcagatcaactctgaggaa
attccaggcctgtgctggctcaacaaggatgaacagatctttcaaatcccatggaagcat
gcagccagacacggatgggaaatgaagaaagacgcttgcttgtttgagaaatgggccatt
cacacaggaagatacaaggtcggtgagaaggccccagatcccaagacttggaaagccaat
ttccgctgtgccatgaactcgctgccagacataaaggaagtgaaagacaaaagcatcaac
aagggcagcagcgccgtccgggtctaccagatgctgccggcagctgcgaagaccgaactc
aaagagcgaaggtccaggtcatgccgagactcaaagaaaaagccccccaaaatggagttt
gagaataattgctcagaacatatatcagacatcgtgcacataagcagcatcgacgaacaa
ggacgctacacagaccacagctactctgggcaggaaatggacgttcacagcactagcaca
ggcctgccttcagcacccacagaatgtgatgcgagcagtctggcagcccttgggaatggc
ttgcaaatatcaatagcggacagtacgaacgacctctatccattccaggtgtcgccatcg
tcttcctgtacatcagcaacggaagaagaggaggaagaagaaagagctcttacagaggac
ttactaaagatgacttacccaacagcatcttggcatcagacaaatgtagatgggaaaggc
tacctaagcaatgaagcaggtgtccagttcactgaccccagcactagggatcttaccgca
gagtttgaaaaaatggcaggggaaatagaactccgattttgtactgacatgaagacgaca
gctgacattctatcgtggctggatcccaattacggatcttaccttccggcaattacttgc
atgtattag
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integrated database retrieval system
