Paenibacillus woosongensis: QNH46_09555
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Entry
QNH46_09555 CDS
T09437
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pwn
Paenibacillus woosongensis
Pathway
pwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH46_09555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwn03019
]
QNH46_09555
03009 Ribosome biogenesis [BR:
pwn03009
]
QNH46_09555
Enzymes [BR:
pwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNH46_09555
Messenger RNA biogenesis [BR:
pwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNH46_09555
Ribosome biogenesis [BR:
pwn03009
]
Prokaryotic type
rRNA helicases
QNH46_09555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WHX50861
UniProt:
A0AA95L2N6
LinkDB
All DBs
Position
2124228..2125802
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AA seq
524 aa
AA seq
DB search
MSTFADFGLEPKVLQAITELGFEEATPIQTKSIPIAMTGRDLIGQAQTGTGKTAAFGLPL
ISKIPASEDRIVALIMTPTRELAIQVAEEIGKLSRFKGIRSLPIYGGQDIVRQIRALKKK
PQMIIGTPGRLLDHINRKTIKLDDVQTVVLDEADEMLDMGFMDDIQSILKLVPEERQTML
FSATMPANIQKLAQQFLKNPEHVSVIPKQVSAPLIDQAYIEVHERQKFDALTRLLDMESP
ELAIVFGRTKRRVDELAEALQKRGYSADGLHGDLSQNQRDNVMRKFRDGSIDVLVATDVA
ARGLDVSGVTHVVNFDLPQDPESYVHRIGRTGRAGKEGVAWSFVTPREIDHLHFIERITR
QKIARKPLPSIAEAIEGKQRITAERLIELVEAAELNEYKGIAISLLEQYDSVNLLAAAFK
LITGDKGDNTNIELTPEEPIRVKRRKPDIRSSGRKPYGYGNRSGSGYRRDNRDGGGRGGY
GSKGGYNRDGGRDYQSSSDRKPRPASNGGDRRPPRRNDNPSYDA
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
ttgagcacatttgcagatttcggcctagagcctaaagttctacaggctataacagaactc
ggatttgaagaagccaccccgattcaaaccaaatcaattcctattgcgatgacaggtcgc
gacctcatcggacaagcacaaacgggaacaggcaagacggcggcgttcggtcttccgctg
atcagcaaaattccggccagtgaggatcggatcgtagcgctgattatgaccccgacccgg
gagcttgctattcaggtagccgaagaaatcgggaagctgtcccgtttcaaaggcatccgt
tccctgccgatttatgggggacaggatatcgtccgccaaattcgcgcattgaagaagaag
cctcaaatgattatcggcacccctggccgcttgctcgatcacattaatcgcaaaacgatt
aagcttgacgacgtacagactgtcgtactggatgaagccgatgaaatgctggatatgggc
ttcatggacgatattcagtcgattctgaagcttgtccccgaagagcgccaaacaatgcta
ttttccgctacaatgccagcaaatatccagaagcttgcccagcaatttcttaaaaacccg
gagcatgtttccgttattccaaagcaagttagcgcaccgttaatcgatcaggcatatatc
gaagtgcatgaacgccagaaattcgacgcgcttacgcgtttgctggatatggaatcaccg
gagctggctatcgtattcggacggacaaaacgccgcgtagacgaattggcggaagctttg
cagaaacggggctattccgcggacggccttcatggcgatttgtctcagaaccagcgtgat
aacgtcatgcgcaagttccgggatggcagcatcgacgtgcttgtggctactgacgtagca
gcacgtggcttggatgtatccggcgtaacccatgtcgtcaacttcgacctgccgcaggat
ccggagagctatgtgcaccgcatcggccgtacgggacgggcgggcaaggaaggcgtagcc
tggtctttcgttacgccgcgcgaaatcgaccatcttcacttcatcgagcggatcacccgc
cagaagatcgcccgcaagccgctgccttccattgccgaggcgatcgaagggaaacagcga
attacggcagaacgcctgattgagcttgtggaagcagccgaactgaacgaatacaaagga
atcgccatttcgctgctggagcaatatgattcggttaacctgctggcagccgcgtttaag
ctcattaccggagacaaaggggataacacgaatatcgagctgactccagaggagccgatt
cgagtaaaacgccgcaagccggacatccgttccagcggacgcaagccgtatggatatggc
aaccgcagcggcagcggataccgcagagataaccgcgatggcggtggccgtggaggttac
ggcagcaaaggcggttataacagagacgggggaagggattaccagtcttcctcggatcgc
aagccgcgtcctgcaagcaacggtggggaccgtagaccgccaagacgcaacgacaatcct
tcgtacgacgcttaa
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