Paenibacillus woosongensis: QNH46_11200
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Entry
QNH46_11200 CDS
T09437
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pwn
Paenibacillus woosongensis
Pathway
pwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH46_11200 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwn03019
]
QNH46_11200 (rny)
Messenger RNA biogenesis [BR:
pwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
QNH46_11200 (rny)
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Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
KH_KhpA-B
HDOD
KH_2
Motif
Other DBs
NCBI-ProteinID:
WHX51162
UniProt:
A0AA95L393
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Position
2453825..2455366
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AA seq
513 aa
AA seq
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MHDGVWVALVAAALFFGFVIGYFIRKSLAEAKISSAEHAASQILESAKKDAEALKKETVL
EAKDEVHKIRTEADKDIRERRNEIQRQERRLLQKEESLDKKLESLERKEEQVAGKEKRIE
ETQQQIDQIYKTQVQELERISNLTMEDARIIILNNVEQEVRHETAQLIKDIEQQAKEEAD
KKSREIITLAIQRCAADHVAETTVSVVALPNEEMKGRIIGREGRNIRALETLTGIDLIID
DTPEAVILSGFDPIRREIARTALEKLVADGRIHPARIEEMVEKSRREVDERIREYGEQAT
FEVGVHALHPDLIKILGRLKFRTSYGQNVLKHSMEVAYLAGLMAGELGEDIVLAKRAGLL
HDIGKALDHEVEGSHVEIGVELAKKYKEHPVVINSIASHHGDCEATSVIAMLVGAADALS
AARPGARRETLETYIRRLEKLEEISESFEGVEKSYAIQAGREVRVMVQPDKIDDAEAFRL
ARDITKTIENELDYPGHIKVTVIRETRAVEYAK
NT seq
1542 nt
NT seq
+upstream
nt +downstream
nt
atgcacgatggagtctgggtcgctctcgttgcagccgctttattctttgggttcgtgatc
ggatattttattcggaaatctcttgcagaagctaaaatttccagtgcggaacacgctgca
agccaaattttggaaagtgcaaagaaagatgcagaagcactgaagaaagaaacagtcctg
gaagctaaggatgaagtccataaaatccggactgaagctgataaagacattcgtgaacgt
cggaacgaaattcaacggcaggaaagacgattgttgcaaaaggaagagtcgctggataaa
aaattagaatcgcttgaacgaaaagaagagcaggtggcaggcaaagagaagcgaattgaa
gaaactcagcagcagattgatcagatttataaaactcaggttcaggaattggaacgtatc
tccaacttgacgatggaggacgccagaatcattatcctaaacaatgtagagcaggaagtt
cgccatgaaacggcgcagctgatcaaggacattgaacagcaggcgaaagaggaagccgat
aagaaatcgcgtgaaatcatcacgctggctattcaacgttgcgcagccgatcatgttgcg
gagacgaccgtatctgttgtagcattgcctaacgaagagatgaagggacggatcattggc
cgcgaaggacgcaacatccgcgcgcttgagacgttgaccgggatcgatctcattattgac
gatacgccggaagccgtcatcttgtctggctttgatccgattcgtcgggagatcgctcgt
actgcattggagaaacttgtggcggacggacggattcacccggcgcgaatcgaagaaatg
gtcgagaaatcgcgtcgtgaagtggatgaacggattcgtgaatacggtgagcaagcaacc
ttcgaagtgggagttcatgcgcttcatcctgatctgatcaaaattttgggacgtcttaaa
ttccggacaagctacggtcagaacgtgctgaagcactcgatggaggttgcttacttggcc
ggccttatggcaggcgaattaggcgaagacatcgttctggccaagcgggctggactgctg
catgatatcggtaaagcgcttgatcatgaagtggaaggatcgcatgtcgagatcggcgtg
gaattggctaagaaatacaaggagcacccggtggttatcaatagtatcgcatcccaccac
ggtgactgcgaggccacatcggtgatcgccatgctggtcggtgcagctgatgccttgtcg
gcagcaaggcctggcgctcgtcgcgaaacgctggaaacatatatccggcgcctcgagaag
cttgaagagatttcggaatcgttcgaaggcgtggagaaatcctatgccatccaagcgggc
cgtgaggttcgcgttatggtacagcccgataaaatcgacgatgcagaagcattccgcctg
gctagggacatcacgaagacgattgagaatgaactggattatccagggcatatcaaggtt
accgtcatacgcgagacacgggcggttgaatacgcaaagtaa
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