Paenibacillus woosongensis: QNH46_16440
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Entry
QNH46_16440 CDS
T09437
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
pwn
Paenibacillus woosongensis
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwn03400
]
QNH46_16440 (addA)
Enzymes [BR:
pwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNH46_16440 (addA)
DNA repair and recombination proteins [BR:
pwn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QNH46_16440 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WHX47724
UniProt:
A0AA95L052
LinkDB
All DBs
Position
complement(3553697..3557890)
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AA seq
1397 aa
AA seq
DB search
MSIPKPPGSYWSDDQWKAISLSGSNMLIAAAAGSGKTAVLVERIIRKLCSTDQPLSVDRL
LVATFTKAAATEMRQRIREALEKELSRNPANEHLGRQLAMLGRASITTLHSFCMEVIQRY
YTLIPLDPGFRIASESETALLRQEVLEELFEEKYALEREGSPFLRLVDWFGGERSDDAVF
FLVQKLYDFSRSHPWPDFWLRQAAEAFAAPSVEALEKSLWVSSILSDAKLTLEGAGELLR
QAEAIALSPGGPQPYAATLEEDIAMVELMLAYVHEGQWSLLHGKFDAIAFGKLKPCKKDQ
TDPTLQERVKTLREEAKKTLIELRTQLFGRSPEAFLDEMNQMAPLMAELSSFVMEFAERY
RKEKTAKGWLDFSDLEHYCLQILRHPDSTWDKVVPSAAALEYQQQFEEVLLDEYQDTNTV
QEDIVRLISRQEPGNRFMVGDVKQSIYRFRLAEPGLFLQKYRSYGGDASAEGLRIDLARN
FRSRREVIDAVNYVFRQVMNETVAEIAYDSRSELVYGEGYPDNDGEDYRPELLLIDRSGD
AAAEGETPAAEGESDGARIDEELADLEAVRLEARAIAAKIREMRQKPLRIYDKHLKGLRP
VEYRDMVILLRSTLTWAPAMMEELRMEGIPAYGEVSQGYFDASEVETMMSLLQVIDNPMQ
DIPLAAVLRSPLCNLSEEELAEIRLAAPKGNFYEAVQAYIGPEETDMAGVVATAEISAEA
GAEAASWASAEASTAAMAEAAEETMAEIRNSGLLAPEVLADEPKGPLAAASSAEKGGEAG
TAPGELWTAEHSAAQAGVKHATLRDRLIVYTGQLEAWRNKAREGELGDLIRDIYRQTGFL
DWVGGLPGGAQRQGNLRALLDRARQFEKSSAARGLFRFLRYITRLRENGGDLGAAASAGE
QEDAVRIMTIHKSKGLEFPVVFVAGLSKMFNRQDLNTPFLMHKEMGYGPKFVDENTRVSY
PTLPNLAIRRRAQLELLAEEIRVLYVALTRPKDKLILISSVKDLAKSVESWGGILANGTE
QLPDYLIARGRSYLDWIGPSLIRHPAAAQLRDFAGLPEPAADYGQGSGPDWVIGFIAAEQ
FVTAFAQAAAAKAWAPEEKAMLQALIAGGPVPVRPSEDTRFEDAVKARLDWHYPYEMAGR
ISAKTSVTEMKTLLAMQEEPPMDWLAVEEARMERRNVLEEKAEYKLHLRRPKFMEEKRMT
PTERGTAYHMLMQHLPFDQKADEETVRRTLQQLVELQIMSREQSAEMDTARVAGFLQSPL
GALLRQADWIRREMPFSYGLSVEEAYPRFASATAGVADEAEADGKRLAIKELAGETVLIQ
GIIDCLFAVGDKLYLLDYKSDRVLEHQGGVPALAETYRFQLELYAKAIEQIMGRKVDEKW
LYFFDHGEAVKLQESSQ
NT seq
4194 nt
NT seq
+upstream
nt +downstream
nt
atgagcataccgaagccgccgggcagctactggagcgacgatcaatggaaagcgatatcg
ctgtccggaagcaatatgctgatcgccgcagcggccggctcgggcaaaacggcagtgctg
gtggaacgcatcatccgaaagctgtgcagcacggatcagccgcttagcgtggaccgcctg
cttgttgcgacttttactaaagcggccgctacggaaatgaggcagcgcatcagggaggcg
ctagagaaggagctgtcccggaatcctgcgaatgagcatctggggcggcagcttgccatg
ctgggacgtgcttcgattacgacccttcactctttttgcatggaagtgatccagcgctat
tatacgttgatcccgcttgaccccggattccgcatcgcatcggaaagcgagaccgccctg
cttcgccaggaagtgctcgaggagctgtttgaggagaaatatgcgctcgagcgggagggc
agcccatttttgcgtctggtggactggtttggcggagaacgcagcgacgatgctgttttt
ttcctggtgcagaaattgtacgatttctcgcggagccatccgtggccggacttttggctg
cggcaggccgcagaggcctttgccgctcctagcgtggaggctttggagaaaagcttgtgg
gtcagcagcatactgagcgatgcgaagctgaccctcgaaggagctggggagctgctgcgg
caggccgaggcgatcgcattgtcccctggcggaccgcagccttacgctgccactctggaa
gaggacatcgcgatggtcgagctgatgctggcttacgttcatgaagggcagtggtctttg
ctgcatgggaaattcgatgccatcgcgtttggcaagctgaagccgtgcaagaaggatcag
accgatccgacactgcaggagcgggtcaaaacgctccgcgaggaagcaaagaagacactc
atagagctgcgcacgcagctgttcggccgctcgcccgaggcgtttctggacgagatgaac
cagatggctccgctgatggccgagctgtcttctttcgtcatggaattcgccgagcggtac
cgcaaggagaaaacggccaaaggctggctcgacttctctgaccttgagcattactgcctg
caaattctgcgccatccggattcaacatgggataaggtcgtaccctccgctgccgcgcta
gaatatcagcagcaattcgaagaggtgctccttgacgaatatcaggatacgaatacggtg
caggaggatatcgtccggttgatttcccggcaggagccgggcaaccgctttatggtcggc
gacgtgaagcagagcatatacaggttcaggctggctgagcctggactattcctgcagaag
taccggagctatggcggggatgcgtcggcggaagggcttagaattgaccttgcccgcaat
ttccgcagccggcgggaagtgatcgatgctgtcaactatgtcttccggcaagtcatgaat
gagactgttgcggaaattgcatatgattcccgttcggagcttgtgtatggggaaggctac
cctgacaatgacggggaggactaccgccccgagctgctactgatcgaccggagcggcgat
gcggccgcggagggtgaaactccggcagcggagggcgagtcagacggagcgagaatcgac
gaggagcttgctgatttggaggcggttcgtctggaggcccgggccattgcggccaaaata
cgggagatgcggcagaagcctctgcgcatttacgataaacacctgaagggcttgcgtccc
gtggaataccgggacatggtcattttgctccgctctacattgacctgggctcccgctatg
atggaggagcttcggatggaaggcatcccggcctatggagaagtgagccaggggtatttc
gacgcctctgaggtcgaaacgatgatgtccctgctccaggtcattgataacccgatgcag
gatattccgctggccgccgtccttcgttcgccgctctgcaatttgtccgaggaggagctg
gctgaaatacgtcttgctgctccaaaaggcaatttctatgaggctgtgcaggcttatatt
ggcccggaagagacggatatggcaggggtggtggctactgctgaaatttcggcagaggca
ggggcggaggctgcgtcatgggcttcggctgaagcttcgacagctgctatggcagaggct
gcggaagagacgatggcagagatcaggaatagcgggctgctggcgccagaagtcttggct
gatgaacctaaaggtccacttgcagctgcatcctcagcagaaaagggcggcgaagctgga
acggcgccgggcgagctttggaccgcagagcactcggcagctcaggccggagtaaagcac
gctacgttaagggacaggctaatcgtctatacggggcagctcgaagcttggcggaataaa
gccagggagggtgaacttggcgacctgattagggacatttaccggcaaaccggatttttg
gactgggtcggcggtttgccgggaggagctcagcggcaggggaacctgcgggcccttctt
gaccgggctagacaattcgagaaatcctcagccgcgcgcggcctgttcaggtttttaaga
tatattacgaggctgcgggagaacggcggtgaccttggcgcggcggcttctgccggagaa
caggaggatgccgtccggattatgaccatccacaaaagcaaggggctggagttcccggtc
gtctttgtggcgggcttgtccaaaatgttcaatcggcaggatttgaatacgccgttcctg
atgcataaggaaatgggctacgggcctaaattcgtcgatgagaatacgcgggtgagctat
cccacgcttccgaatctggcgattcgccgccgggcgcagctggagctgctggccgaggaa
atacgagtgttgtacgtggcgctgaccaggcctaaagacaaactcattctgatttcctcg
gtcaaagatttggccaaatcggtggagtcatggggaggtattctggcgaacggcaccgag
cagcttcctgattatttgattgcccgggggcgcagttacctggattggatcgggccttcc
ttaatccgccacccggctgcggcgcagcttcgcgatttcgccgggttaccggagcctgct
gcggactatggacagggaagcggtcctgactgggtgatcggcttcattgccgccgagcag
tttgtgactgcctttgcacaagcggcagcggccaaagcttgggcgccggaggagaaggct
atgctgcaggccctgatagccggcggtcccgtacccgtccgcccgtcggaggatacgagg
ttcgaagatgccgtgaaggcaaggctggactggcactacccttacgaaatggccggccgg
atttcggccaagacatcagttaccgaaatgaagacgcttttggccatgcaggaggagccg
ccgatggattggctcgccgtagaggaagcgcgcatggagcggcggaacgttcttgaagag
aaggccgaatacaagctgcatttgcgccgtccgaagtttatggaggagaagcggatgacg
ccgaccgaacggggaacggcgtatcatatgctcatgcagcatcttccttttgaccagaag
gcggacgaagagacggttcgccggacgctgcagcagcttgtggagctgcagatcatgtcc
cgggagcagagcgcggaaatggatactgcgcgggttgccggatttttgcaaagcccgctg
ggcgctttacttcgccaggctgattggattcggcgggagatgccgtttagctacggcctg
tctgtggaggaagcttacccgcggttcgcttcggctacagcgggcgtcgcagatgaggct
gaagcggacgggaaacggctggcgattaaggaactggccggagagaccgtgctgattcaa
gggattatcgactgcttgtttgctgtcggggataagctgtacttgctggattataaaagc
gaccgggtgctggagcaccagggaggcgtgcctgcgctggcggaaacctatcgtttccag
cttgagctgtacgccaaagcgattgaacagatcatgggccgcaaggtcgatgagaaatgg
ctgtactttttcgatcatggggaagcggtcaaattgcaggaatcatcgcagtag
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