Paenibacillus woosongensis: QNH46_16445
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Entry
QNH46_16445 CDS
T09437
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
pwn
Paenibacillus woosongensis
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwn03400
]
QNH46_16445 (addB)
Enzymes [BR:
pwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNH46_16445 (addB)
DNA repair and recombination proteins [BR:
pwn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
QNH46_16445 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
AAA_29
UvrD-helicase
nSTAND1
DDE_5
Motif
Other DBs
NCBI-ProteinID:
WHX47725
UniProt:
A0AA95KUT0
LinkDB
All DBs
Position
complement(3557887..3561411)
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AA seq
1174 aa
AA seq
DB search
MSLQLIIGRSGSGKSSLILERITSMLRADPAGPPIILIAPEQGTFQIERAIVQSEQLYGT
VRAQVLGFHRLALRVMQETGGSALIPISEEGKKMLLYKIMRRHRKELKLYKQSGDQLGVI
DRINALYSELKKHDADFSALDKYGEVLERSVGESPLLKDKLHDLSMIYREFDQELSKLYI
DAEDHVVKLAEGAPNSSYLRGADIWIDGFQSFTPQEYKAIGALMSAASSMTVSLTLDRPY
DDGVMPHELNLFHSTAVTYMKLRELAEECGVEVKPAEVLGTRPFPRFKGNGILSHLEFAY
EHRTPWKGAAPPEDLSAALSLQAAGSRRAEIEGAARAMVALAREQGARWRDMALLVRNLE
DYDHLVGPLFEEYGIPYFFDQKRSVLYHPMVELIRGALDVVLKFWKYEDVFRCVKSEFLL
PLDGSLTRSDMDRLENYALASGIHGYRWNDGRPWKSTPSLSLEGPERPAEQAESESMRLL
ERCREAIVTPLSAFETRLKRSRNTREMCTAIYRLLEDTEAAHRLDKLAHEAHRQGRPQEA
MEHRQLWSAVLDLLDQIVEMMGEEQLSLDIFAGIMETGLQDLKLSLVPPSLDQVLIGSTD
RTRSSHVKHLFLLGINEGIMPASLQEEGVLSDQERTRLSEIGIGLAPGLTRRLLDERFLI
YEALSAASRSLWLSYPLADEDGKALLPSEVIRHVKTIFPSLQERFLAEAPAAGDPEERQL
EYVSRPAPTLSRLIDQLRLWRNGEPISPVWWNVLGWYKTRPEWDGKVARLLGSLEYRNKV
RGLSAATSRRLYGKRLRTSVSRMEKFSACPFSHFASHGLKLKERQIYRLKAPDIGQLFHA
ALSSMALTFKEQNRSWGSLSPEQCLKEAEDAVDRIAPKLQGEILLSSKRYGYITRKLKNI
VGRASIILGEHSRRGSFEPIGLELDFGPGQTLPPLTFELPNGCVMEIVGRIDRVDVAEGE
QGLLLRVIDYKSSQTDLKLHEVYYGLSLQMLTYLEVLLASSESWLGERAMPAGTLYFHVH
NPLLQSSNGMSPEQAEQEMLKRFKMKGLLLADRDVISKMDSVLDKGYSDILPVAVKADGG
FYSSASVATEEQWHKLLRSAKRTITEIGTRITEGDVRITPYRLGTETACTHCAFKPVCRF
DETVEDVSYQVLSKPGKDKLWELFEQNDREEGQR
NT seq
3525 nt
NT seq
+upstream
nt +downstream
nt
atgtcacttcaattgatcatcggccgttcaggaagcggcaagagcagcttgattctggag
cggattacctcgatgctaagagccgacccggcgggtccgccgattattttgatcgccccg
gaacaggggacgttccagattgaacgggctatcgtccagtcggagcaattatatggtacc
gtcagagcccaggttctcggctttcaccgtctggctctgcgggttatgcaggaaacgggc
ggatcggcgcttataccgatcagcgaagagggcaagaagatgcttctttacaaaattatg
cgcaggcaccgcaaagagctgaagctatacaagcagtcgggcgatcagcttggtgtaatt
gaccggatcaatgcgctgtacagcgagctgaagaaacatgatgccgatttctcggcattg
gacaaatatggggaagtcctcgaaaggtccgttggcgaatcgccgctcctgaaggataag
ctgcatgatctcagcatgatctatcgcgaatttgaccaggaattatccaaactctacata
gatgccgaggatcatgtcgtcaagcttgccgagggtgctccgaattcctcctatcttcgc
ggggccgacatttggatcgacgggttccagtcttttaccccccaggagtacaaagccata
ggcgcgctcatgtcggcggcctcctcgatgaccgtatcgctgacgttggaccgtccttat
gatgacggagttatgccgcatgagctgaatctgttccattccacggcggtaacttacatg
aagcttcgcgagcttgcagaggaatgtggagtggaggttaagccggcggaggttctcggc
acacgtccgtttccacgctttaaaggcaatgggatattatcgcatttggagtttgcctat
gaacaccggaccccgtggaagggtgcggcaccgccggaggatttatcggccgcattgtct
ctgcaagcggcgggcagccggcgcgcggaaattgaaggagccgcgcgggcgatggttgcc
ctggccagggagcagggggctagatggcgagacatggctctgcttgttagaaatttggag
gattacgaccatctcgtcggcccgttattcgaggaatacggcatcccctatttcttcgac
cagaagcggagcgtcctctatcatcccatggtagagctgattcgtggcgccttggacgtt
gtattgaaattttggaaatacgaggatgtattccgctgcgtcaagagtgaatttctgctg
ccgctggacggcagcttgacgcgcagcgatatggaccggctcgagaactatgcgttggcg
agtggaattcacggctaccgctggaacgatggccgaccctggaagagcacgcccagcctg
tcattggaaggccctgagcgtccggccgagcaagcggagagcgagtccatgcgcttgctg
gagcgctgccgcgaggcgattgtaacgcctttatccgctttcgagacgagattgaagcgg
agccgcaatacccgtgaaatgtgcacggcgatctacaggctgctcgaagataccgaggct
gcccatcgtctggacaagctggcgcatgaggcccatcgtcagggaaggccgcaggaggca
atggaacatcgccagctatggagcgccgtcctggacctcctcgatcaaatcgtagaaatg
atgggagaagagcagcttagcttggatatattcgctggaattatggagacagggctgcag
gatctcaagctgtctcttgttccgccatccctggatcaggtattgatcgggagcacggat
cgtacgcgttcaagccatgttaagcatctatttctgcttggaatcaatgaaggcatcatg
cctgccagcctccaggaagaaggcgtgctcagcgatcaggagcggacacggctctccgag
atcggcatcgggcttgcccctggcctgacaagaagactccttgatgagcgcttccttatt
tacgaggccttgtcggcggcgagccgctcgctgtggctaagctatccgctggctgacgaa
gacggcaaggcccttctgccttccgaggttatccggcatgtgaagacgatttttccgagt
ctgcaggaacgcttcctggcagaagctccggccgcaggcgatcccgaggaacggcagctt
gaatatgtgagccggccggcgccaacattgtcccggttaatcgatcagctgcggctatgg
agaaacggcgagccgatctctccggtatggtggaacgttctgggctggtataagacccgc
ccggaatgggatggcaaagttgctcgcctgcttggatcactggaataccgcaacaaggta
cgggggctgtctgccgcgacgagccggcgattatacggcaagcgtcttcggactagcgtg
tcccggatggagaagttttcggcatgtccgttttcacatttcgcctctcacggtttgaag
ctgaaggaacggcaaatttaccggctgaaggcgccggatatcggccaactgttccatgcg
gcgctaagctcgatggcgcttacgttcaaggagcagaatcgcagctggggcagtctttcc
cccgaacaatgtctgaaagaggcggaggacgcggtcgaccggattgcgccaaagctgcag
ggtgaaatcctgctgagctcgaagcgttatgggtacattacccgcaagcttaagaatatc
gtgggccgtgcctctatcattctcggagagcattccagaagaggcagcttcgagccgatc
ggcctggagctggatttcggtcccggacaaacccttcccccgctgaccttcgagcttcca
aacggatgcgtcatggaaatcgttggacggatcgaccgggtcgacgtcgcggagggagag
caagggctgctgctgagagttatcgattacaagtcaagccagacggatctgaagcttcac
gaggtgtattacggcttgtcgctgcaaatgctcacctatcttgaggtgctgcttgcgtcc
agcgaatcgtggcttggggaaagggcaatgcccgccggcacgctgtactttcatgtccat
aacccgcttctgcagagcagcaacggcatgagcccggagcaagctgaacaggagatgctg
aaacgattcaaaatgaagggactgctgcttgcggatagggatgtcatttccaagatggac
agcgttttggataaggggtattccgatattcttccggtcgccgtcaaagctgacgggggc
ttctacagcagcgcttctgtcgctacggaagagcaatggcacaagctgcttcgatcggcc
aagcggaccataacggaaatcggaacgagaattacggaaggagacgtccgaatcactcct
tatcggttgggcaccgagacggcatgcacgcactgcgcctttaaaccggtctgccgtttt
gatgaaacagtggaggacgtttcttatcaggtgctgagcaagcccggcaaggataagctg
tgggagctgttcgagcaaaatgacagagaggaggggcaaagatga
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integrated database retrieval system
