KEGG   Paenibacillus woosongensis: QNH46_20510
Entry
QNH46_20510       CDS       T09437                                 
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
  KO
K03090  RNA polymerase sigma-B factor
Organism
pwn  Paenibacillus woosongensis
Brite
KEGG Orthology (KO) [BR:pwn00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pwn03021]
    QNH46_20510
Transcription machinery [BR:pwn03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     QNH46_20510
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r4_2 Sigma70_r3 Sigma70_r2 HTH_23 GerE HTH_Tnp_ISL3 HTH_38 HTH_50 Sigma70_ECF KORA HTH_10 HTH_28 HTH_29 Cyclophil_like2 TnsD HTH_24 MarR_2 Phage_antitermQ MarR HTH_31 DUF1492 HTH_7 CENP-B_N
Other DBs
NCBI-ProteinID: WHX48429
UniProt: A0AA95L0K5
LinkDB
Position
complement(4441619..4442392)
AA seq 257 aa
MSDKMTPPESLNESTSLIWKYQQTKDNEIVTVLIQKYEPMVKMAAGKIARNRPDLYEDLY
QVGQMALIRLLQQYDIELGIPFEPYAMKSMIGHMKNFLRDKSWYIQVPRRIKEKGALVQQ
AIDELTVKLERSPDVKEIAEYLDLSVEETVEVLAGRECYHYVSLDSPLSQDESAATLGEL
ISSEANDYDTVEKRMDLQQALSQLKEQEQQVLLLAFQEGQSQRAIAQQLGVSQMSVSRIQ
KRATEKLKQIMSNSNLY
NT seq 774 nt   +upstreamnt  +downstreamnt
atgagcgataaaatgactccccccgagtctttgaatgaatcaaccagcctgatctggaaa
tatcagcaaacgaaagacaacgagattgtgacggttctcattcagaaatacgagccgatg
gttaagatggcagcaggcaaaatcgcccgcaaccgccctgacctgtatgaggatttatat
caggtcggacagatggcgctgattcggctgctgcagcagtatgacatcgaactgggcatc
ccgtttgagccttatgccatgaaaagcatgatcgggcacatgaagaactttctgcgggac
aagtcctggtacatccaggtaccgcgccgtatcaaggagaagggcgcccttgtccagcag
gcaatcgatgagctgacagtgaaattggaacgttcccccgacgtgaaagaaatcgccgaa
tatttggatctttcggtggaggaaacggtcgaagtactcgctgggcgggaatgctaccac
tatgtatcgctggattctcctttatcccaggacgaaagcgcggctacgctcggtgaacta
atcagctcggaagccaatgattatgacaccgtagagaagcggatggatttgcagcaggcg
cttagccagctgaaggagcaggagcagcaggtattgctgctggccttccaggaggggcaa
tcccagcgtgccatcgcccaacagttgggggtttcgcaaatgagtgtttcccggatccag
aaaagagcgacagagaaattgaagcaaattatgtcaaactctaatctatattag

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