Paenibacillus woosongensis: QNH46_21195
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Entry
QNH46_21195 CDS
T09437
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pwn
Paenibacillus woosongensis
Pathway
pwn03420
Nucleotide excision repair
pwn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
QNH46_21195
03430 Mismatch repair
QNH46_21195
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwn03400
]
QNH46_21195
Enzymes [BR:
pwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
QNH46_21195
DNA repair and recombination proteins [BR:
pwn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
QNH46_21195
MMR (mismatch excision repair)
Other MMR factors
QNH46_21195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
Viral_helicase1
AAA_30
AAA_22
AAA_11
Motif
Other DBs
NCBI-ProteinID:
WHX48554
UniProt:
A0AA95I111
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All DBs
Position
complement(4582411..4584138)
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AA seq
575 aa
AA seq
DB search
MFESLSHIQRTIVFEKKGLFAVKACPGSGKTYTTAARLAHKLNNWQLSTRGIAVLSFTNV
AWHEIRKMLDQNLGMTINFPHHLGTLDSFINKFIFLPFGHLIMGCGKRPILVGEPHGTWS
AGNYDYDYDYDQYFDCTSFSINDGVIPTTADFKRFHFKWRNKDGSESGHVNRLRETKMKY
WKQGYATQADANYFSLKILEKYPNIAQSIAMRFPELIIDEAQDTSEIQMGIINKLIDNGL
KNVMLVGDPDQAIFEWNDARPDLFIDKFNEWGKNSVVLDENRRSSQNICNVTYNLTSRDN
PPVAVNETVKNYGHIPEVICYKPECIQQTIDYFLHLCEQHQIEISHEKVAVIFRSKSIQS
QILSQPERIEHPWLVGRYYVRDIAKSKYMAEKGRILDAFKLAEKAIYKGLHNKNYCSAND
LNNWILERGFVHHRQNIMHILRCLPSPTGSIIEWVKQASDILRCHNMPIKMNLKPNCVDC
SFDELFRITEDCSERFRIGTVHTVKGETFDAVLLILKERGAKGGYYRTMLSQGLKTLDDE
ELRIAYVGMTRPSKLLVIAVPSEKSRTVWELKLLN
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaaagtttatctcacattcaacgaacaatcgtgtttgaaaagaaagggttattt
gccgttaaggcttgtcctggaagtggaaaaacatatacgacagcagcaagattggctcat
aagctaaataattggcaactatcaactagggggattgcggtattatcctttacaaacgtg
gcatggcatgaaattcggaaaatgctcgatcaaaacttagggatgacaataaatttccct
catcatcttggaacgttggatagttttattaataaatttatattcttgccgtttggacat
ttaataatgggttgtggaaaacggcctatccttgttggtgaaccgcatggcacatggtca
gctgggaattacgattatgattatgattatgatcagtattttgattgcacaagcttttca
attaatgatggtgttataccaacaacagcagattttaagaggtttcattttaaatggaga
aataaggatggttctgaaagtggtcatgtgaatagattgcgcgagacaaaaatgaagtat
tggaaacaaggatatgcaacgcaagcagatgctaattacttctcgttaaaaatccttgaa
aagtatcctaatattgcacagtctattgctatgagatttccagaactcattatcgatgag
gcacaagatacatccgagattcaaatgggcataatcaataaattaattgataatggactt
aaaaatgtaatgttagttggggaccctgatcaagccatttttgagtggaacgacgctcgg
cctgatctttttatcgataaatttaatgagtggggaaagaactctgtcgttttagatgaa
aatagacggagctcccagaatatttgtaatgtaacatataatcttacttctcgtgataat
ccaccggtcgcggttaatgagactgttaagaattatggccacattccggaggttatttgt
tacaaaccggaatgtatccaacaaacaattgattactttcttcatttatgtgaacaacat
cagattgagattagtcatgaaaaggttgctgttatttttagaagtaagtctatacagagc
cagattctatcccaacctgaacggattgaacatccatggttagtaggtaggtactacgtt
agagatatagcaaaaagtaaatatatggccgaaaagggacgtattttagatgcatttaaa
ctagcagagaaagctatatacaaaggattacataataaaaattactgttccgcaaatgat
cttaataattggatcttggaaagaggctttgttcatcatcgacagaacataatgcatata
ctgaggtgtttgccttctccgactggtagtattattgaatgggtaaaacaggcgtcggat
attcttagatgtcacaatatgcctataaaaatgaatctcaaacctaattgtgtggattgc
agttttgacgaattatttagaattacagaagattgctctgaaagatttagaataggtact
gtacatacggttaaaggggaaacttttgatgctgttttactcattttaaaagaaaggggt
gccaaagggggttattatagaacgatgctttctcaaggcttaaaaacacttgatgatgag
gaattacgtattgcatatgttggaatgacgaggccaagtaaactacttgtaattgcggtc
ccaagtgagaaaagtagaactgtttgggaacttaagctattaaactaa
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