Paenibacillus woosongensis: QNH46_22670
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Entry
QNH46_22670 CDS
T09437
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
pwn
Paenibacillus woosongensis
Pathway
pwn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
QNH46_22670
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwn03019
]
QNH46_22670
03009 Ribosome biogenesis [BR:
pwn03009
]
QNH46_22670
Enzymes [BR:
pwn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
QNH46_22670
Messenger RNA biogenesis [BR:
pwn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
QNH46_22670
Ribosome biogenesis [BR:
pwn03009
]
Prokaryotic type
rRNA helicases
QNH46_22670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_22
AAA_19
CMS1
Motif
Other DBs
NCBI-ProteinID:
WHX48820
UniProt:
A0AA95KVR6
LinkDB
All DBs
Position
complement(4922812..4924212)
Genome browser
AA seq
466 aa
AA seq
DB search
MTTFDQWGISPELIRTLQHHGISTPTPVQEEAIPVLLAGEDAIVQAQTGTGKTLAFLLPI
MDKLKADRPDPQALIITPTRELAIQITAEARKLAAAREGISILAAYGGQDVERQLRKLHN
GTQLVIGTPGRLLDHLRRGSLTLGAVRMLVLDEADQMLHMGFLAEVEAIIHMVPKNRQTM
LFSATMPDNVKRLARSYMDRPRDIRIAETSRVTLDSIRQILVECTDRGKQGALIELIRTH
RPYLAVIFCRTKRRASKLNEALQEAGFASDELHGDLSQSKREQVMRAFRDAKLELLVATD
VAARGIDVEGVTHVFNYDIPQDVDSYIHRIGRTGRAGGKGVAITFASPRDIDALRHIERG
IGMKLERRRQEKSETAASVSRDTAGSRESKDSAGKGRRPEGRKPAGGRAGEGRRGQGSGK
GSRERQSTRSTQARGAKPSNTRSGHASRSDSGGRRGRSERGGRRGR
NT seq
1401 nt
NT seq
+upstream
nt +downstream
nt
ttgacgactttcgatcaatggggcatttcgcctgagcttattcgaacgctacaacatcat
ggcatcagcactccgacaccagtacaggaggaggctattcctgtcctgctggcaggggag
gacgcgattgtccaggcccagacgggaacagggaagacgctggcattcctgctgccgatc
atggacaagctgaaggcggatcgccctgacccacaggcgctgatcatcacgccaacccgg
gaattggccattcaaattacggcggaggcgcgcaagctggctgctgcccgcgaggggata
tcgattctcgctgcgtatggaggacaagatgtggagcggcagcttcgcaaattgcacaat
ggcacccaactggtcatcggtacaccgggccgattgctggatcatttgcgccgcggttcg
ctgacgctgggtgctgtacgcatgctcgtgctcgatgaagcggaccagatgctgcatatg
ggcttcctggccgaagtagaggcgattattcatatggtaccgaaaaaccgccagaccatg
ctgttttccgcgacgatgccggacaatgtcaagcggcttgcccggtcatacatggaccgg
ccgcgggatatccgcatcgcagagacctcccgtgtcacgctggacagtatccgccaaatt
ctcgtggaatgcacggaccgtggcaagcagggggctttgatcgagctcatccgcacccat
cgcccttatctggcggtcatcttctgccggacgaagcggcgtgcgagcaagctgaacgaa
gctttgcaggaggccgggtttgcctccgacgagctgcacggggatttatcccaatccaaa
cgggagcaggtgatgcgcgcattccgcgatgcgaaactggagctgctcgttgctaccgat
gtagcggccagaggcatcgatgttgaaggcgtaacccatgtgtttaattatgatattccg
caggatgtggacagctacatccaccggatcggccgtacgggccgggctggcgggaaaggg
gtggcgataacctttgcttctccgcgagatatcgatgcactgcgccatattgaacggggc
atagggatgaagctggaacggcgccgtcaggagaagagcgaaacagcagcttctgtgagc
cgggatacggcaggcagtcgggaatccaaggattccgccggaaaaggaagacggcctgaa
ggcaggaagccggcaggcggaagagcaggcgaagggcgccgcggccaaggcagcgggaag
ggcagccgtgaacgtcaatccacccggtccacccaggctaggggcgctaagccatctaat
acgagaagcggacacgcctcccgcagcgacagcggcggccggcgcggcagatcggaacgg
ggagggcgccgggggcggtaa
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