Paulownia witches'-broom phytoplasma: HGD80_00030
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Entry
HGD80_00030 CDS
T09302
Symbol
rplF
Name
(GenBank) 50S ribosomal protein L6
KO
K02933
large subunit ribosomal protein L6
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
HGD80_00030 (rplF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
pwp03011
]
HGD80_00030 (rplF)
Ribosome [BR:
pwp03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Large subunit
HGD80_00030 (rplF)
Bacteria
HGD80_00030 (rplF)
Archaea
HGD80_00030 (rplF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_L6
TAFII28
Motif
Other DBs
NCBI-ProteinID:
QYC31024
UniProt:
A0ABX8TNT1
LinkDB
All DBs
Position
2011..2565
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AA seq
184 aa
AA seq
DB search
MSRVGNKAIEVPNAVKVDIKDRNFISVEGPKGKLEYQFNHRLTITNENKVITVKRPNDEI
FMKKIHGTTRALLSNMVEGVSKGFQKTLKIVGLAYRAQIKDKQLILSLGFSHPVSVAIPD
NLEVVVNQNTEIVIKGIDKQLVGEFAAKNVKLRKPEPYKGKGIRYVGQYVRQKAGKSAKK
TRKD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgcgtaggaaacaaagcaattgaagtccctaatgcggttaaagttgatatcaaa
gatagaaattttatctcagttgaaggccctaaaggcaaattagaatatcaattcaatcac
agattaacaatcactaatgaaaacaaagtcatcacagtaaaacgccccaatgatgaaatt
tttatgaaaaaaattcacggcaccactagagccttactttccaatatggtagaaggcgta
agcaaaggctttcaaaaaaccttaaaaattgtagggttagcttatcgtgctcaaattaaa
gataaacaactaattttatctttgggtttttctcatcctgtaagcgttgccattcctgat
aatctagaagtggtagttaaccaaaacacagaaattgttatcaaaggaattgacaaacaa
cttgtcggcgaatttgctgccaaaaacgtaaaactacgtaaaccagagccttacaaaggt
aaagggatccgctacgtaggacaatacgttagacaaaaagctgggaaaagcgctaaaaaa
acaagaaaggactaa
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