Paulownia witches'-broom phytoplasma: HGD80_00160
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Entry
HGD80_00160 CDS
T09302
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwp03016
]
HGD80_00160 (truB)
Enzymes [BR:
pwp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
HGD80_00160 (truB)
Transfer RNA biogenesis [BR:
pwp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HGD80_00160 (truB)
Prokaryotic type
HGD80_00160 (truB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Ig_ILCR1
Motif
Other DBs
NCBI-ProteinID:
QYC31049
LinkDB
All DBs
Position
17362..18213
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AA seq
283 aa
AA seq
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MNGFFLVNKPEKMTSHDVVFQIKKKFHFDKVGHTGTLDPLASGLLIICVGKATKLAFLFD
KLPKTYQGTFLFNKHYDTLDVTGKLLDTKNTPLTDCTIQKSFASFHQKKYLQIPPMFSAV
KIKGKKMYRLARKNQVVDIPPREVFIHHFEKTSLLCRDQVDFLAHVSKGTYIRSLARDLA
LQLNTYGALLRLRRTAIGTHLLQNAKTIENVELNDLILDSTFFAAYDALILNDYLIKLVK
NGTHLDQRQITTKKPFIVKDSNKNFVAYYDTLDENKYYPRYFF
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgaacggattttttttagtcaacaaaccagaaaagatgacatcacatgatgtagttttt
caaattaaaaaaaaatttcattttgacaaagtaggacacacaggaactcttgatccttta
gcctcaggacttttaattatttgtgtgggtaaagccactaaactggcttttttgttcgat
aaactaccaaaaacttatcaaggaacctttctttttaataaacattatgatactttggat
gtgacaggtaaattgttggataccaaaaacacccctttaactgattgtaccatccaaaaa
agttttgcatcttttcatcaaaaaaagtatttgcaaatacctcctatgttttcagcagtt
aaaattaaaggaaaaaaaatgtatcgtttagcacgcaaaaatcaagttgtagatattcct
ccaagagaagtttttattcatcattttgaaaaaacatctttgctttgtcgcgaccaagta
gattttttggcacatgtttccaaaggcacttatattagaagtcttgcgcgcgatctagct
ttacaattaaatacttatggtgctcttcttcgtttgcgaagaactgcaattggcacgcat
ttattacaaaacgctaaaactattgaaaatgtagaactcaatgatttgattttggatagt
actttttttgctgcttacgatgcacttattttaaatgattatttaattaagttagtaaaa
aacggcactcatttagaccaaagacaaataactactaaaaaaccttttatagttaaagat
agtaataaaaattttgttgcttattatgataccttggatgaaaataaatactatccgcgt
tattttttttaa
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