Paulownia witches'-broom phytoplasma: HGD80_00275
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Entry
HGD80_00275 CDS
T09302
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HGD80_00275
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwp03019
]
HGD80_00275
03016 Transfer RNA biogenesis [BR:
pwp03016
]
HGD80_00275
Enzymes [BR:
pwp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
HGD80_00275
Messenger RNA biogenesis [BR:
pwp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
HGD80_00275
Transfer RNA biogenesis [BR:
pwp03016
]
Prokaryotic type
tRNA degradation factors
HGD80_00275
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
KH_1
S1
PNPase
PI3K_p85B
PFam54_60
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QYC31061
UniProt:
A0ABX8TNX2
LinkDB
All DBs
Position
36461..38608
Genome browser
AA seq
715 aa
AA seq
DB search
MLKKVFETTNLKDSFQVEIGTYARNVDASILVRYQDTVVLTTTVFSRKPNNLDFLPLTVI
YQEKLYAAGKIPGSFLRREGRSNDHEILTSRLIDRSLRPLFPDYFQQEVQVINTVLSLDP
DFKSELASMLGSSLTLLISEIPFFEAISGVYVGKINDKFIINPTLQQLVNSTLHLMVAGT
KHNVTMIEAHANEVSEQDFLEAINFAHQYIKKLCLFQENIKQQFAPAKITNTLQQIEQTQ
QQAFFAKHQSQVKQAILSCNSKNDLQQLKEQILDQTKQTPFFKTIDTTTVFDYEAHKKHL
QTTETLFQKLSKQETRSLILQEKIRPDKRGLEEIRTLESQIDLLPRAHGSALFTRGQTQS
LAAVTLGCLSESKIIDGLSDEQNKRFMLHYNFPPFSVGAVGRYTAPSRREIGHGTLAEKA
ISQVLPEQKDFPYTIRVVSEILESNGSSSQATVCASSLALMASGVPLKKAVAGMSVGLVF
DQATNKYVILSDIQGLEDHVGDMDLKIAGTNKGITALQMDLKIQGIPFKILQEAFLQAKK
GRLHILEHMSQTISQPRLEVSKYAPKVCMMQIKPEKIRDIIGSGGKIINQIIESHDGVKI
DIEQDGRVFLMHSNLETVKKTVAFIESLIQEIQIGTCYQASILRFLSDKQGKMIGAVAQV
CPGIEGLIHLNQMKFQKITDVLKIGETVSVKCTKINDRGRIDFLLLPKNTQEKNS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgttaaaaaaagtttttgaaactactaatttaaaagattcttttcaagtcgaaatagga
acttacgccagaaacgttgatgcttccattttagtacgctaccaagatacagtggttctt
acaactactgtttttagtcgcaaacccaataatcttgattttttacctcttactgttatt
tatcaagaaaaattatatgctgctggaaaaattcctggcagttttttacgccgagaagga
cgttccaacgatcacgaaatcctcacttcacgcctcatcgaccgttctttacgcccccta
ttccctgattattttcaacaagaagtgcaagtaattaatacagttttaagcctagaccct
gattttaaaagcgagcttgcctccatgcttggaagctctcttactctattgatttctgaa
atccccttttttgaagctatttccggagtttatgtaggaaaaatcaacgacaagtttatc
atcaatcctactttgcaacaacttgtcaattctactctacatttgatggttgcaggtacc
aaacacaacgttactatgatagaagcacacgccaatgaagttagcgaacaagacttttta
gaagccattaattttgctcaccaatatattaaaaaactgtgcttatttcaagaaaatatc
aagcaacaatttgcacctgctaaaataacaaacaccttgcaacaaatcgaacaaacccaa
caacaagccttttttgccaaacaccaatcccaagttaaacaagctattttaagttgcaac
agcaaaaacgatttacagcaattaaaagaacaaatcctagatcaaaccaaacaaactcct
tttttcaaaactattgacactaccactgtttttgattacgaagcccacaaaaaacattta
caaacaacagaaactctatttcaaaaattatccaaacaagaaacacgttctttaattttg
caagaaaaaataagaccagataaaagaggattagaagaaataagaactcttgaatctcaa
attgatttgttgccccgcgctcatggttctgctttgtttactagaggacaaacccaaagc
cttgctgcagtgaccttaggatgtttatcagaaagcaaaattattgacggtctaagcgac
gaacaaaataaacgttttatgcttcattacaactttcctcctttttcagttggtgcagtt
ggtcgttatactgcccctagtagacgagaaatcggacacggcactcttgccgaaaaagcc
atatctcaagttttgcccgaacaaaaagacttcccctacactattagagtagtttctgaa
attctagaatctaacggctcttcttctcaagccactgtttgtgcttcttctttggcatta
atggcatcaggagttcctttaaaaaaagcagttgcaggaatgtcagtaggattagttttt
gaccaagcaacgaataaatacgttattttaagcgatatccaaggtttagaagaccacgtt
ggagacatggatttaaaaatcgcaggcaccaataaaggaattactgctttacaaatggat
cttaaaattcaaggaatcccttttaaaattttgcaagaagcttttttgcaagccaaaaaa
ggacgccttcatattttagaacacatgagccaaacaatttctcaacctcgtttagaagtt
tcgaagtacgcccctaaagtttgtatgatgcaaatcaaaccagaaaaaattcgtgatatt
attggaagtggtggcaaaatcatcaatcaaattattgaatctcatgatggtgtaaaaatc
gatattgaacaagacggacgcgtttttttaatgcattccaacttagaaacagtcaaaaaa
acagtcgcttttattgaaagtttaatccaagaaattcaaataggcacttgttatcaagcc
tctattttgcgttttttaagtgacaaacaaggaaaaatgattggagctgtggcacaagtt
tgtccaggaatcgaaggacttatccaccttaatcaaatgaaatttcaaaaaatcaccgat
gttttaaaaataggtgaaacggtttcggttaaatgcaccaaaatcaacgaccgcggaaga
attgattttttgcttttgcccaaaaatacacaagaaaaaaactcttag
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