Paulownia witches'-broom phytoplasma: HGD80_00395
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Entry
HGD80_00395 CDS
T09302
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HGD80_00395 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwp03019
]
HGD80_00395 (rny)
Messenger RNA biogenesis [BR:
pwp03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HGD80_00395 (rny)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
Chordopox_A13L
KH-I_KHDC4-BBP
KH_2
DUF4199
Tox-REase-9
Motif
Other DBs
NCBI-ProteinID:
QYC31082
LinkDB
All DBs
Position
65860..67446
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AA seq
528 aa
AA seq
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MKGDYWRTHCIMGCSLLVFALICGSIIGYFFYSFFNQKKLEEKKQTFDNKLKEKEKDLQQ
REQEMMRNAKIEITSLRQKLELDLEQRTNTIVYLESKNNRREELLNNRTESLNKREDHLD
SEQQIISHTKKNLEQQIKEQETILNTQKQQLEKIASLTQDQARQIIMKETRDQTTYEMMS
YIKQEEEKAKSEASKKAKTLLVLAMQKYAGDITGEKNISVVNIPNEDMKGRIIGRQGRNI
KSLEVLTGVDLIIDESPCTIILSSFDPIRREIAKKTLEFLVSDGRIHPSRIEKALETSTI
EVDNFIKEIGEEAAFITKIGEVHPDLIKILGKLHFRISYSQNVLKHSLEVAFLAGKLASE
IGENEILARRAGLFHDIGKALDHEMEGSHVEIGVSIASKYKEKKEVIDAIASHHEDQEPQ
SIIAVLVAIADTLSSARPGARKESVENHIQRLTKLETIANATEGVAKSYAIQAGREIRVI
VEPDKIADNFIFQTARTIKEQIEKDISYNGVIKVTVIRETRAVEMAKL
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaggtgattattggcgaactcattgtataatgggttgttcccttcttgtctttgct
ttaatttgtggatcaattatcggctattttttttattctttttttaatcaaaagaaatta
gaagaaaaaaaacaaacatttgacaacaaactaaaagaaaaagaaaaagatttgcaacaa
cgcgaacaagaaatgatgcgtaatgctaaaatagaaataacttctttaagacaaaaatta
gaactggatttagaacaaagaaccaacacaattgtttatttagaatccaaaaataatcgt
cgtgaagaattgcttaacaacagaactgagagcctcaataaaagagaagatcatttagat
tctgaacaacaaataattagccatactaaaaaaaacctagaacaacaaatcaaagaacaa
gaaacaattttaaacacccaaaaacaacaattagaaaaaatagcttccttaacgcaagat
caagccagacaaatcataatgaaagaaacaagagaccaaaccacttatgaaatgatgtca
tatattaaacaagaagaagaaaaagccaaaagcgaagcatctaaaaaagccaaaactctt
ttagttttagccatgcaaaaatatgctggcgatattacaggagaaaaaaatattagcgtt
gttaacattcctaacgaagatatgaaaggacggattattgggcgccaaggcagaaatatt
aagtctttggaagttttaaccggagtagacttaattattgatgagtccccttgcaccatt
attttaagtagttttgacccgattagaagagaaattgccaaaaaaactttagaatttttg
gtctctgatgggcgaattcatccttctcgcatcgaaaaagccttagaaacttcaaccata
gaagtagacaattttattaaagaaataggcgaagaagctgcttttattactaaaatcggc
gaagtgcaccccgacttaattaaaattttgggaaaactgcacttccgcattagttacagt
caaaatgttttgaaacattctttggaagtagcttttttagctggtaaacttgcctctgaa
attggcgaaaacgaaattcttgcaagaagagcaggactttttcatgatatcggtaaagct
ctagaccacgaaatggaaggaagccacgtagaaattggcgtttctattgcttccaaatac
aaagaaaaaaaagaagttatcgacgctattgcctctcatcatgaagaccaagaaccccaa
tcaattatcgctgttttagttgcaatagcagacaccttgtcttccgctagaccaggagcc
agaaaagaatcagtagaaaaccacatccaaagactaaccaaattagaaactattgctaat
gcaacagaaggagttgccaaatcttatgctattcaagctggacgcgaaattcgtgttatc
gttgaaccagacaaaatcgcagacaattttattttccaaactgcccgcaccattaaagaa
caaattgaaaaagacattagttacaatggtgttatcaaagttactgttataagagaaacc
agagctgtggaaatggctaaattataa
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