KEGG   Paulownia witches'-broom phytoplasma: HGD80_00905
Entry
HGD80_00905       CDS       T09302                                 
Name
(GenBank) HU family DNA-binding protein
  KO
K03530  DNA-binding protein HU-beta
Organism
pwp  Paulownia witches'-broom phytoplasma
Brite
KEGG Orthology (KO) [BR:pwp00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pwp03032]
    HGD80_00905
   03036 Chromosome and associated proteins [BR:pwp03036]
    HGD80_00905
   03400 DNA repair and recombination proteins [BR:pwp03400]
    HGD80_00905
DNA replication proteins [BR:pwp03032]
 Prokaryotic type
  DNA Replication Initiation Factors
   Initiation factors (bacterial)
    HGD80_00905
Chromosome and associated proteins [BR:pwp03036]
 Prokaryotic type
  Nucleoid associated proteins
   HU (heat unstable protein)
    HGD80_00905
DNA repair and recombination proteins [BR:pwp03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Supressor
      HGD80_00905
SSDB
Motif
Pfam: Bac_DNA_binding DUF3479 REC104
Other DBs
NCBI-ProteinID: QYC31166
LinkDB
Position
186323..186655
AA seq 110 aa
MNKKELIKEVAKQLKTSVVKTEEFYNSFENALMKAITSNEEVVLSSKIGKFILKTRKAHT
TPETKFIINKQTGKKTGKRTGKNLKIPAKTVVSFKMSKSLKDKVKTLKLK
NT seq 333 nt   +upstreamnt  +downstreamnt
atgaataaaaaagaattaatcaaagaagttgcaaagcaactaaaaacttcagttgtgaaa
actgaagaattttacaattcatttgaaaatgccctcatgaaagctatcacatcaaatgaa
gaagtggttttatcctctaaaattggcaaattcatcttaaaaactagaaaagcccacaca
acccccgaaactaaattcatcatcaataaacaaacaggcaaaaaaacaggaaaaagaact
ggtaaaaacttaaaaatacccgcaaaaacggttgttagttttaaaatgtcaaaatcactt
aaagataaagtcaaaacccttaaattaaaataa

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