Paulownia witches'-broom phytoplasma: HGD80_01625
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Entry
HGD80_01625 CDS
T09302
Symbol
lysS
Name
(GenBank) lysine--tRNA ligase
KO
K04567
lysyl-tRNA synthetase, class II [EC:
6.1.1.6
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
HGD80_01625 (lysS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pwp01007
]
HGD80_01625 (lysS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pwp03016
]
HGD80_01625 (lysS)
Enzymes [BR:
pwp01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.6 lysine---tRNA ligase
HGD80_01625 (lysS)
Amino acid related enzymes [BR:
pwp01007
]
Aminoacyl-tRNA synthetase
Class II (A)
HGD80_01625 (lysS)
Transfer RNA biogenesis [BR:
pwp03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
HGD80_01625 (lysS)
Prokaryotic type
Other AARSs
HGD80_01625 (lysS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_2
tRNA_anti-codon
tRNA-synt_2d
Phage_TAC_12
STAT_linker
NAGLU_C
Motif
Other DBs
NCBI-ProteinID:
QYC31265
LinkDB
All DBs
Position
311668..313203
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AA seq
511 aa
AA seq
DB search
MATKLSEQEIIRHQKMNELKKIKIDPFGKKFVPSHSIEQILLQYQKADSLALEQSQINVC
VAGRIVLKRGQGKAGFLHLQDFNFRMQAYIKLDLVGKDAFQIYQNCDLGDIIGIKGFLFK
TKTQELTIKALEFIHLTKALKPLPDKFHGLQNREEMRKNRYIDLIVNEKTRQVFLTRSLI
MKYIRNFFDNQGFLEVETPILQPTLGGASAKPFITHHNALNCDFYLRIATELPLKKLIVG
GMNKVYEIGRLFRNEGIDATHNPEFSTIEAYLAYADMQDIMDLTKQCLQELAQKFFGKLQ
FTYQNQEIDFSHFAKVSMVTSIKEKTGIDFTDNFTLEQCLSLAKKHQIEVMHHFSQGHII
EAFFGKYVENTLIQPTFVYGHPLEISPLAKQNEADPRFTDRFELFILGKEFANAFSELND
PIEQEKRFLNQLQQKQLGNDEANDMDYDFLNALNYGMPPTGGLGMGLDRLVMLLTDTANI
RDVILFPHCKNQNKFSQNKTSNKVLTNNDNK
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggcaacaaaattaagcgaacaagaaattattagacatcaaaaaatgaatgaattaaaa
aaaataaaaatcgatccttttggaaaaaaatttgtcccttctcattccatcgaacaaatt
cttttgcaataccaaaaagcagatagtctagctctcgaacagtcacaaatcaatgtttgt
gtagctggcagaatcgttttaaaaagaggacaaggcaaagcaggttttttgcatttacaa
gattttaatttccgaatgcaagcatatataaaactggatttagtgggcaaagatgctttt
cagatttatcaaaattgtgatttaggagatatcataggcatcaaaggttttttatttaaa
accaaaacgcaagaattaaccattaaagccttggaatttattcatcttaccaaagcccta
aaacctttacctgacaaatttcatggcttgcaaaaccgcgaagagatgagaaaaaatcgc
tatattgatctaatcgtaaacgaaaaaacaagacaagtatttttaactcgcagtttgatt
atgaaatacattagaaatttttttgataatcagggctttttagaagtagaaactcctatt
ttacaaccaactttgggaggcgcttctgccaaaccttttatcactcatcacaacgctctt
aattgtgatttttacttgagaattgctaccgaattaccccttaaaaaattaattgttggt
ggaatgaataaagtctatgaaatcggacgtcttttcagaaatgaaggaattgatgccaca
cataatcccgaatttagcactattgaggcttacttggcttatgctgatatgcaagatatt
atggacttaacaaagcaatgcttgcaagaattggcccaaaaattttttggcaagttgcaa
tttacttaccaaaaccaagaaattgatttttcccattttgcaaaagtaagtatggttaca
tcaatcaaggaaaaaacaggaattgattttacagataattttaccttggaacaatgcctt
tctttggcaaaaaaacaccaaattgaagttatgcaccattttagtcaaggacatatcatt
gaggctttttttggaaaatacgtagaaaacactctcattcagcctacttttgtctacgga
catccactggaaataagtcctttggcaaaacaaaacgaagctgatcctcgctttactgac
cgttttgaactttttattttaggtaaggaatttgccaatgcttttagcgaacttaacgac
cctatcgaacaagaaaaacgttttttaaatcaattacaacaaaaacaattaggcaacgac
gaagccaatgacatggactatgatttcctaaacgcccttaattatggcatgcctccaact
ggtggtcttggaatgggacttgatcgtttggttatgcttttaaccgatactgcaaatatt
cgtgatgttattttatttccacattgtaaaaatcaaaataaatttagtcaaaacaaaaca
tcaaataaagtcctaacaaataacgataacaaataa
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