Paulownia witches'-broom phytoplasma: HGD80_01630
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Entry
HGD80_01630 CDS
T09302
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03030
DNA replication
pwp03430
Mismatch repair
pwp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGD80_01630
03430 Mismatch repair
HGD80_01630
03440 Homologous recombination
HGD80_01630
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwp03032
]
HGD80_01630
03400 DNA repair and recombination proteins [BR:
pwp03400
]
HGD80_01630
Enzymes [BR:
pwp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGD80_01630
DNA replication proteins [BR:
pwp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGD80_01630
DNA repair and recombination proteins [BR:
pwp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGD80_01630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
Motif
Other DBs
NCBI-ProteinID:
QYC31266
UniProt:
A0ABX8TQ91
LinkDB
All DBs
Position
314060..316810
Genome browser
AA seq
916 aa
AA seq
DB search
MRGVFYLQSFYSLLQSLNSLETLVQKAKENDYDFVALSDDNLYGMPTFLKLCHNYQIKPI
LGLKINFLHNNQLATLLIYAKNDQGIKNLIQISTIIKNEETPQITLNQIAHLGKDLFALI
PGENPFFDDMFFRDQKDKFFQIATQLQKIFDELVLGISYQNSFLELLSENIIDFANHFQI
PYVPINKTCYDTFQAQPTYQILSQMENKKNDDQTDLSFLTKDNFDSAYNAQTHKAMFAYL
KKLIFSIKYQNYLPQKMLLPSFVDFLQPQKITAKEHLKQISYEGLRQYIDFKNSKYTKYQ
QRLDQELQIIADMEYDNYFLIVGDVVRYAKKQGILVGPGRGSSSGSLVCFCLQITEIDPL
KYDLIFERFLNPQRKTMPDIDLDFPDNTRDLIIQYVCQKYGTKHVASIITFGRFVSQKAI
INELVKFMPTVKEFQTKRVLAYLDKKNTYQKETLDLQMKNLLTMASYIEGIPRFTGTHPA
GIILSQMPLDQIIPLQKGTHNNLQQTQWEASFLESIGLLKIDFLGLRSLTLMNKMVLVIQ
KTNPHFGLFKIPLNDTKTFELLQQGKTIGIFQLESYNAKIFLQKMMPQKFEDLIALLALN
RPGPIDSFNMFLKNRHQKTTTFFSPLIDFILQPTYGIILYQEQIMQIVAVFAKYSLAQAD
LFRRAISKKEKDLLLQEKNNFIAQSKEQGRNLTIANKLYDYILKFANYGFNKSHSVAYSL
ISYRMAYLKANHFIAFVITLLNDAIGDATQTEILLKEVIQKGIIIEAPHIFSSQDKYYFK
DNKLFLPLTIIKGINVAFCQELMKEQKKLIKEHQKLTKTAKMPLYYSFKTFKQQLFPFLT
EPLLTNLIFAGTLDKMGLNRNTLEQNKDLKEVKYYPYSDYEPKIHPELTLKELVIKQKKT
LGFGLHNLLINQKNKS
NT seq
2751 nt
NT seq
+upstream
nt +downstream
nt
atgagaggcgttttttatttgcaaagtttttatagcttattacaaagtcttaattcttta
gaaactttggtacaaaaagccaaagaaaatgattatgattttgttgctttgagcgatgat
aatttatatggcatgccaacttttttaaaattatgccataactatcaaatcaaacctatt
ttaggactaaaaataaattttttgcacaacaatcaactagcaacacttttaatttatgcc
aaaaacgaccaaggaatcaaaaatttaattcaaatttcaactattattaaaaatgaagaa
acaccccaaattaccttaaatcaaattgctcatttaggtaaagatttgtttgctttgatt
cctggagaaaatcccttttttgatgatatgttttttcgcgaccaaaaagataaatttttt
caaatagctactcaattacaaaaaatatttgacgaacttgtattaggtatttcttatcaa
aactcctttttggaattactttctgaaaatatcattgattttgcaaaccacttccaaatt
ccttatgtaccaattaacaaaacttgctatgatactttccaagcccaaccaacctatcaa
atactttcacaaatggaaaataaaaaaaacgacgaccaaactgatttatcttttttaacc
aaagataattttgatagcgcctacaacgcccaaacacataaagcaatgtttgcttattta
aaaaaattaatcttttctattaaatatcaaaattatttaccacaaaaaatgttgttgcct
tcctttgttgattttttacaaccccaaaaaataactgccaaagagcacttaaaacaaatt
tcttatgaaggtttgcgccaatacatcgattttaaaaactctaaatataccaaataccaa
caaaggctagatcaagaattacaaattatagctgatatggaatatgacaattatttttta
attgtaggtgatgttgtaagatacgccaaaaaacaaggtattttagtaggtcctggtaga
ggctcttcttcgggttctttggtgtgtttttgtttacaaattacagagattgacccttta
aaatatgaccttatttttgagcgttttttaaatcctcaaagaaaaactatgccagatatt
gaccttgattttccagacaatacaagagatttaattattcaatatgtttgtcaaaagtac
ggcaccaaacacgtagcaagtattattacttttggtagatttgtaagccaaaaagccatt
atcaatgaattagttaaatttatgcccacagtaaaggaattccaaactaaacgcgttttg
gcatatttggataaaaaaaacacttatcaaaaagaaactttggatttgcaaatgaaaaac
ttacttacaatggcatcttatatcgaaggaataccacggtttacaggaacccatccagca
ggaattattttaagccaaatgccccttgatcaaattattcccttacaaaaaggcactcat
aataacttacaacaaacccaatgggaagcttctttccttgaatcaatcggacttctcaaa
atagattttttaggattaagaagtcttactttgatgaataaaatggttttagtcattcaa
aaaactaatccccattttggtctttttaaaatccctttaaacgacacaaaaactttcgag
ctgttgcaacaaggaaaaacaatagggatttttcaattagaatcttataacgccaaaatc
tttttacaaaaaatgatgccccaaaagttcgaagacctaattgccttacttgccttaaat
agaccaggacccatcgattcttttaatatgtttttaaaaaaccgccatcaaaaaactacc
actttttttagccccttaattgattttatcctccaacccacttatggcattattctttat
caagaacaaattatgcaaattgtagctgtctttgccaaatacagtcttgcccaagcagac
ctttttagaagagctattagcaaaaaggaaaaagatttattattgcaagaaaaaaacaac
ttcattgcccaaagcaaagaacaaggacgcaaccttacaatagctaacaaactttatgat
tatattttaaaatttgccaattacggttttaacaaaagtcacagtgtcgcttattcttta
attagttatcgtatggcttatttgaaagctaatcattttattgcttttgtaattacttta
ttaaatgatgctattggagatgcaacccagacagaaattttgctcaaagaagttatccaa
aaaggtatcattatagaagcaccccatatatttagtagccaagataaatattatttcaaa
gacaataaattatttttgcctctaactattattaaaggaataaatgttgctttttgccaa
gaattaatgaaagaacaaaaaaaattaattaaagaacaccaaaaattaactaaaactgcc
aaaatgcccctttattattcttttaaaacctttaaacaacaattgtttcctttcctcacc
gaacctttattaactaatttaatttttgcaggcacccttgataaaatggggctaaaccgc
aatactttagaacaaaacaaagatttaaaagaagttaaatattatccatattcggattac
gaacctaaaatacaccccgaattaactttaaaagaacttgtcattaaacaaaaaaaaaca
ttaggctttggacttcataatttattaattaatcaaaaaaataaatcttaa
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