Paulownia witches'-broom phytoplasma: HGD80_01760
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Entry
HGD80_01760 CDS
T09302
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03030
DNA replication
pwp03430
Mismatch repair
pwp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGD80_01760 (dnaX)
03430 Mismatch repair
HGD80_01760 (dnaX)
03440 Homologous recombination
HGD80_01760 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwp03032
]
HGD80_01760 (dnaX)
03400 DNA repair and recombination proteins [BR:
pwp03400
]
HGD80_01760 (dnaX)
Enzymes [BR:
pwp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGD80_01760 (dnaX)
DNA replication proteins [BR:
pwp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGD80_01760 (dnaX)
DNA repair and recombination proteins [BR:
pwp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGD80_01760 (dnaX)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
AAA_22
DNA_pol3_gamma3
AAA_5
RuvB_N
AAA_19
nSTAND3
AAA_24
AAA_16
AAA_2
NPHP3_N
AAA_14
AAA_30
RCF1-5-like_lid
AAA_assoc_2
AAA_7
RNA_helicase
TsaE
AAA_18
Mg_chelatase
DUF5906
SSO3021_2nd
Glyco_trans_1_2
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
QYC31290
UniProt:
A0ABX8TQB4
LinkDB
All DBs
Position
complement(342093..344042)
Genome browser
AA seq
649 aa
AA seq
DB search
MSYLVLYRKYRPQTFADVVGQEIIIQTLKNAIRYQKINHCYLFSGNKGTGKTTLAKIFAK
AINCLLPNQGDVCCSCHYCQNFTKANTDITEIDGASYNGVDEIRELQDKAQYKAHTGKYK
VYIIDEVHVLTPNAFNALLKILEEPPEHVVFILITTEIYKIPDTIFSRAQSFAFENLNLK
NITAQLTKIAALENMFITEDAIKSIACHSEGGMRNALSLLDQVSAYQNNLITSEDVANIK
GTVSARIIKKLFQNLLKKEAIKALQLLHKAIDSGKNIDLLILDLIDAIKDYLIWNAKNKK
DSKTSPLYQDQKILLLEETNHIDHFLRILIKLQQDLKKSDQKKSLVEIAFLQICSLHSFQ
FQANLQENQQFVTNKTNIYNNEKASLALDETNAKENYEPTKLTQNNTEKIKPTKLASIAN
EKPPKTEYLHPVQDLQSQNNFSQKKPNNSTTSELTQQNNLPSQNSQETKSPTKKNPYFSN
SSLCDLISFAINILSNQDEPTKNTITNFWTNLQNRYSTHSYYKNVAEILDRGKIVALSQS
QQMILVYEDEDAFELVLQKNIKQKALEILNNDTFAITDYIAFLKQDWQALETFYNKNHPH
PNQASIAKFTATCNFDLDLYQNKATQPTKPAIIQLAYDFFGKDIVEIIN
NT seq
1950 nt
NT seq
+upstream
nt +downstream
nt
gtgtcttatttagttttatacagaaaatacagaccacaaacttttgcagatgttgtcggt
caagaaattattatccaaactttaaaaaatgccatcagataccaaaaaattaatcattgt
tatctttttagcggcaacaaaggtactggaaaaactactttagccaaaatttttgccaaa
gccattaattgcttgttgcccaatcaaggagatgtgtgttgttcttgtcattattgccaa
aactttaccaaagcaaacacagacatcacagaaattgatggcgcttcttataatggggtt
gacgaaatcagagaattacaggataaagcccaatacaaagctcacacaggcaaatacaaa
gtctatattattgacgaagttcacgtccttacgccaaacgcttttaacgctttgttaaaa
attttagaagaaccgcccgaacatgtagttttcatcttgattactaccgaaatttataaa
atccctgacaccattttttcgcgcgcccaaagttttgcctttgaaaatttgaacctcaaa
aacatcactgcacaattaaccaaaattgctgctttggaaaatatgtttatcactgaagat
gccatcaaaagcattgcttgccattcggaaggtggaatgcgaaacgcccttagtttgtta
gatcaggtaagcgcttatcaaaataatttgattacttcagaagatgttgcaaatattaaa
ggtacggtgtctgccagaattatcaaaaaattgttccaaaatctactaaaaaaagaagcg
atcaaagcattgcaacttttgcacaaagcaattgattcaggcaaaaacatcgacctttta
attttagatttaattgatgctatcaaagattatttaatttggaatgccaaaaataaaaaa
gattccaaaacatcgccactttaccaagaccaaaaaatattattgcttgaagaaacaaac
cacattgatcattttttaagaatcttaattaaattacaacaagacctcaaaaaaagcgat
caaaaaaaatctttggtagaaattgcctttttgcaaatatgctctctacattcttttcaa
tttcaagccaatttacaagaaaaccaacaatttgtaacaaataaaacaaatatttacaat
aatgagaaagcatcacttgcattagatgaaacaaatgccaaagaaaattatgaaccaaca
aagcttacccaaaacaatacagaaaaaatcaaaccaactaaacttgcgtcaatagcaaac
gaaaaaccaccaaaaacagaatatctgcatccagtccaagatttacagtctcaaaataat
ttttcacaaaaaaaacctaacaattctactacctccgaattgactcaacaaaataacttg
ccttcccaaaactcacaagaaaccaaatccccaacaaaaaaaaacccttatttttccaat
tcttctctttgtgatttgatatcatttgcaattaatattttatctaatcaagacgagcca
accaaaaacacaataacaaatttttggacaaatttacaaaatcgctattctactcacagt
tattataaaaatgtagccgaaattttggatagaggaaaaatagttgctttgagtcaatcc
caacaaatgattttagtttatgaagatgaagatgcctttgaacttgttttacaaaaaaac
atcaaacaaaaagctttagaaattttgaataacgacacttttgcaattacagactacatt
gcttttttaaaacaagattggcaagccttagaaactttttacaacaaaaaccatcctcat
ccaaaccaggcatcaattgcaaaattcacagctacttgcaattttgatcttgacttatat
caaaacaaagcgacccaaccaaccaagcctgctattatccaactagcttatgattttttt
ggtaaagatatagtagaaataattaactag
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