Paulownia witches'-broom phytoplasma: HGD80_02185
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Entry
HGD80_02185 CDS
T09302
Symbol
mutM
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HGD80_02185 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwp03400
]
HGD80_02185 (mutM)
Enzymes [BR:
pwp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HGD80_02185 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HGD80_02185 (mutM)
DNA repair and recombination proteins [BR:
pwp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HGD80_02185 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Ribosomal_S13
Motif
Other DBs
NCBI-ProteinID:
QYC31354
LinkDB
All DBs
Position
complement(419751..420581)
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AA seq
276 aa
AA seq
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MPELPEVQIIVDFLQTQLIGKKIVATKVFYEPAVKNTKEFQKIEQTTILDIQRKGKFLLF
FLTQELVLIGHLRMEGKLFIKPCDEPKHKYEHFAIILEDKSSLRYYDFRKFGRFEVKNQN
IFLTQTTLHQLALDPFEINPVVLYQKILKTKSALKKVLLNQKIISGLGNIYVNEVLFLVK
LHPETKACELSLEQVQEIVTISQKVLTKAIKLGGTTVSTFESQPGIIGYFQNKLQVHGKV
NKPCINCQTKIIKIKVGGRGTYLCPVCQNHNPNKEL
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
atgccagaattacctgaagtccaaattattgtagattttttacaaacacagttaatagga
aaaaaaattgttgcaactaaggtattttatgagcctgctgttaaaaataccaaagaattt
caaaaaattgaacaaactaccattttggatattcaaagaaaaggtaaatttttattattt
tttttaactcaagaattagttttaatagggcatttgagaatggaaggaaaattatttatc
aaaccttgcgatgagcctaaacacaaatacgaacattttgcaattattttggaggataaa
agttctttaagatattatgattttaggaaatttggtagatttgaagttaagaatcagaac
atttttttaacccaaactaccttgcatcaactagccttagatccttttgaaatcaatcca
gttgttttgtatcaaaaaatattaaagaccaaaagcgctttgaaaaaagttttattaaat
caaaaaataatttctggattaggcaatatttatgttaatgaagttttgtttttagtaaaa
ttgcatcctgaaactaaagcttgcgaactgtctttggaacaagtgcaagaaattgtaaca
atttcccaaaaagtacttaccaaagccattaaactgggcggaactactgtaagtactttt
gaatctcagccaggcattataggctattttcaaaacaaattacaagtgcatggcaaagtt
aataagccttgtattaactgtcaaactaaaattatcaaaatcaaagttggcggcagaggc
acttatctttgtcctgtttgtcaaaatcataatcctaataaagaattataa
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