Paulownia witches'-broom phytoplasma: HGD80_03030
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Entry
HGD80_03030 CDS
T09302
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
pwp
Paulownia witches'-broom phytoplasma
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwp03032
]
HGD80_03030
03036 Chromosome and associated proteins [BR:
pwp03036
]
HGD80_03030
03400 DNA repair and recombination proteins [BR:
pwp03400
]
HGD80_03030
DNA replication proteins [BR:
pwp03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HGD80_03030
Chromosome and associated proteins [BR:
pwp03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HGD80_03030
DNA repair and recombination proteins [BR:
pwp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HGD80_03030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
Motif
Other DBs
NCBI-ProteinID:
QYC30768
LinkDB
All DBs
Position
complement(568806..569096)
Genome browser
AA seq
96 aa
AA seq
DB search
MTKKELIKKIAEVNKTSISKTEEFYNSFENTLIKAIISNEEVSLSSKIVKFQLKPRKSYI
GRNPKTKKKLKILAKTVVIFKLSKTIKDKAKTLILK
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacaaaaaaagaattaattaaaaaaatagctgaggtaaataaaacctcaatttcaaaa
acagaagaattttataactcatttgagaatactctaattaaagcaatcatatcaaatgaa
gaagtgtctttatcctctaaaatcgttaaattccaattaaaaccaagaaaatcctacatc
ggtagaaaccctaaaacaaagaaaaaactaaaaatccttgccaaaacagtagtcattttt
aaactttccaaaaccatcaaagataaagcgaaaactttaattttaaaataa
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