Paulownia witches'-broom phytoplasma: HGD80_03295
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Entry
HGD80_03295 CDS
T09302
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp03030
DNA replication
pwp03430
Mismatch repair
pwp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HGD80_03295 (holA)
03430 Mismatch repair
HGD80_03295 (holA)
03440 Homologous recombination
HGD80_03295 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwp03032
]
HGD80_03295 (holA)
03400 DNA repair and recombination proteins [BR:
pwp03400
]
HGD80_03295 (holA)
Enzymes [BR:
pwp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HGD80_03295 (holA)
DNA replication proteins [BR:
pwp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HGD80_03295 (holA)
DNA repair and recombination proteins [BR:
pwp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HGD80_03295 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DUF3740
Motif
Other DBs
NCBI-ProteinID:
QYC30803
LinkDB
All DBs
Position
614403..615374
Genome browser
AA seq
323 aa
AA seq
DB search
MEQTNNIHLIWGKQRFFLEKKIKKIINICKQKQLDVVYYCMQKDLVTELQKELQTTSLIE
SAWKKVVLVDHSEILFQKKPQEMAFLISYLQNPYNNLDLYFFAEKTTKASEVQKIWEKYC
LCKTTNSLEQKDFFKYIMEVFQKDGFQIDTKAIQELVSKTNYNLYLLHQEITKIKLFQSN
DKNITWQLVQKINAFKENDNIFGLINLFLKQNYIDAYQMYQTLKTQKINAFHVINQLTHK
IKELLLVKEMLQQKKSPEEVQKVLPVSQGKVFFLMKEAKLIETQKLNTLFLELIELEYQI
KMGAVNKDIGLEMFLLGKQKVFL
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
ttggaacaaacaaataacatacatttaatttggggaaaacaaaggttttttctagaaaaa
aaaataaaaaaaataattaatatttgcaaacaaaaacaattagatgtagtttattattgt
atgcaaaaagatcttgtaacagagctgcaaaaagaactacaaaccacttctttgattgaa
agcgcatggaaaaaagtagttttggtggatcacagtgaaattttatttcaaaaaaaacct
caagaaatggcttttttaatttcttatttacaaaatccttacaacaatttagatttatat
ttttttgcagaaaaaacaactaaagcatctgaagttcaaaaaatttgggaaaaatattgt
ctttgcaaaacaacaaacagtttggagcaaaaagatttttttaaatatatcatggaagtt
tttcaaaaagatggttttcaaattgataccaaagctatccaagaattagtgagcaaaact
aactataatctttatttattgcatcaagaaataacaaaaatcaaattatttcaatcaaat
gataaaaatataacttggcaattagtacaaaaaatcaatgcttttaaagaaaatgacaat
atttttggattaattaatctttttttaaaacaaaattatattgatgcttatcaaatgtat
caaaccttaaaaacgcaaaaaatcaatgcttttcatgttataaatcaattaactcataaa
attaaagaattgttattggtaaaagaaatgttgcaacaaaaaaaaagcccagaagaagtg
caaaaagttttgccagtttcacaaggcaaagtattttttttaatgaaagaagcaaaattg
attgaaacgcaaaaattaaatacactgtttttagaattaatagaattagaatatcaaatt
aaaatgggtgctgtaaataaagatatcggtttggaaatgtttttattgggtaagcaaaag
gtttttttgtaa
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