Paulownia witches'-broom phytoplasma: HGD80_04560
Help
Entry
HGD80_04560 CDS
T09302
Name
(GenBank) ABC transporter ATP-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
pwp
Paulownia witches'-broom phytoplasma
Pathway
pwp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pwp00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HGD80_04560
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pwp02000
]
HGD80_04560
Transporters [BR:
pwp02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HGD80_04560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_29
T2SSE
RsgA_GTPase
AAA_16
DUF87
CPSase_L_D2
Motif
Other DBs
NCBI-ProteinID:
QYC31000
LinkDB
All DBs
Position
complement(871781..872788)
Genome browser
AA seq
335 aa
AA seq
DB search
MTSSNQVLIEIKNLSKNFSIKKNFLKPDTLLKANQNINLSIFKGETLAVVGGSGSGKSTL
GQVLLQLVKPTSGNVFYHKETIPKTKETQTKDIEEIDLTTLSNKEKRFLRKDLQIIFQDP
FSSLNTHLKISDIIGEGLLIHKMTKGKKDPKYQTMILAIMKKCGIDTSLYDRYPHQLSGG
QRQRIAIARALIIKPKFVVCDEIVSALDVSIQAQILNLLNDLKKDYQLTFLFITHDLGVA
RFLSDRICVMHLGKVIEIAPSESLFKKPYHPYTKQLLNAIPKLKNQNKALEEMPITYETN
KFRFLFHTQKQDLDWYQVAPNHFISCTLKNKATKI
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgacatcctcaaaccaagttttaattgaaattaaaaacttatccaaaaacttttctatc
aaaaaaaactttttaaaaccagataccttactaaaagccaaccaaaatattaatttatcc
attttcaaaggcgaaacattagccgtagttggaggttctggttcaggaaaatcaacttta
ggacaagttcttctacaacttgtaaaacctacttcaggaaatgttttttatcacaaagaa
acaatccccaaaactaaggaaacacagacaaaagacattgaagaaattgatttaactact
ttaagtaataaagaaaagcgctttttaagaaaagatttacaaattattttccaagatcct
ttttcttctcttaacactcatctcaaaatatcagatatcattggcgaaggacttttaatc
cacaaaatgacaaaaggcaaaaaagaccccaaatatcaaacaatgattctagctatcatg
aaaaaatgtggcattgatacttctctttatgaccgttatcctcatcaactttcagggggg
caaagacaaagaattgcaattgcaagagctttaattattaaacctaaatttgttgtttgc
gatgaaatagtatcagcattagatgtatcaattcaagcccaaattttaaaccttttaaat
gatttaaaaaaagattaccaactaactttcttgtttattactcatgatttaggagttgct
cgttttttaagtgaccgcatttgtgtaatgcatttaggaaaagtaattgaaatagcacct
tcagaaagcctttttaaaaaaccttatcatccctacaccaaacaacttctaaatgctatc
cctaaattaaaaaatcaaaataaagctttagaagaaatgccaatcacctacgaaactaac
aaatttagatttttatttcacactcaaaaacaagacctagattggtatcaagtagcccct
aatcattttatttcttgcactttaaaaaataaagctactaaaatataa
DBGET
integrated database retrieval system
