Pectobacterium wasabiae: A7983_02685
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Entry
A7983_02685 CDS
T04535
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pws03016
]
A7983_02685
Enzymes [BR:
pws01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
A7983_02685
Transfer RNA biogenesis [BR:
pws03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
A7983_02685
Prokaryotic type
A7983_02685
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AOR62191
LinkDB
All DBs
Position
complement(579871..580917)
Genome browser
AA seq
348 aa
AA seq
DB search
MENSEQLVWLHGEPQATGSLKSTAEDFLVVEDLGFLPDGDGEQVLVRVRKRGCNTQFVAE
MLAKFTRLPLRAVSYAGLKDRHAVTEQWFCLHMPGKETPDFSSLELDGCDVLEVTRHRRK
LRIGALRGNHFTLVLRQVSDRNEVDARLALIAANGVPNYFGRQRFGRNGNNLEQARLWAN
NEIRVKERSKRSFYLSASRSAMFNQVASTRLAQQQAKSVLCGDALQLTGRGSWFVAKPDE
LEALQVRLDAGELQITAPLPGDGELGTQNDAREFEERALTGQEILWSLVKRERVEPARRA
VLLYPQQMQWEWQDDATVEVKFWLPAGSFATSVVRELLHAQQDTDIGA
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatagcgaacaactcgtctggctgcacggtgaaccacaggctactggctcattg
aaatccactgcggaagattttctggtggtggaagatctggggtttctgcccgatggtgat
ggtgaacaggtcttggtgcgtgtacgcaagcgcggctgcaatacgcaatttgtggctgaa
atgctggcaaaatttactcgcctgccgctgcgcgctgtcagctatgctggcctgaaagat
cgccatgctgtcaccgaacagtggttttgcctgcacatgccgggaaaagagacgcccgat
ttctcctcgctggaacttgacggctgtgacgtgcttgaagtaacccgccaccgccgcaaa
ctgcgcattggtgcgctacggggtaaccattttactctggtgttacgtcaggtgagcgat
cgaaacgaggtggacgcacgtttggcgctgattgctgctaacggtgtccctaattatttc
ggtcgccagcgttttgggcgcaacgggaataatcttgagcaagcgcgtctttgggccaac
aacgaaattcgggtaaaagaacgtagtaaacgtagcttttatctttctgccagccgcagt
gcgatgtttaatcaggttgccagtacgagattggcgcagcagcaagcgaaaagcgttctg
tgtggtgatgcattacagctaacgggacgcggcagttggtttgttgccaaacctgacgaa
ctggaagccttacaggtgcgtcttgacgctggcgaactccagattactgcaccgctgcct
ggtgatggtgaactgggcacacagaatgacgcgcgggaatttgaagaacgggccttgacc
ggacaagaaatattatggtctttggtcaaacgtgagcgggttgaacctgcccggcgtgct
gtgctgctttatccgcagcaaatgcagtgggaatggcaggatgacgcaaccgtggaagtg
aaattctggctacctgcgggcagctttgcgaccagtgtggtacgtgaattactgcatgca
cagcaggataccgatattggcgcctga
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