Pectobacterium wasabiae: A7983_04180
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Entry
A7983_04180 CDS
T04535
Name
(GenBank) RNA polymerase-binding ATPase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pws03021
]
A7983_04180
Transcription machinery [BR:
pws03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
A7983_04180
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
Cas3-like_C_2
AAA_34
Motif
Other DBs
NCBI-ProteinID:
AOR62480
LinkDB
All DBs
Position
936490..939393
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AA seq
967 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAVDTRMITLLFPASGENRLYSRSDAPITRVMFNPGDT
VTSHEGWQLKVDDVREEKGLLVYCGQRLDDETQAELREVFLDSKLTFNKPQDRLFAGQID
RMDRFALRYRARKHQNEQALQQWGGLRGMRASLIPHQLHIAHEVGQRHAPRVLLADEVGL
GKTIEAGMIIHQQLLAGRANRVLIIVPETLQHQWLVEMLRRFNLLFSLFDDERYAEAKLD
SSNPFETEQLVICSLGFVQRSAQRFAQLVNADWDLLVVDEAHHLVWSEESPSPEYQAIEA
LARATPAVLLLTATPEQLGQQSHFARLRLLDPNRFHDYQEFVAEQQQYRPVADAVTLLLA
GETAQAAELNALSDLLGEQDIEPLLKSINSDSDDNQKARQELITMLMDRHGTSRVLFRNT
RQGVKGFPQRILHQIRLPLPAQYQTAIKVSGIMNANKPLETRARDMLYPEQIYQQLEGDD
ATWWNFDPRVEWLLNYLTANRDEKVLVICAQAATALQLEQVLRTREAIRAAVFHEGLSIL
ERDRAAAYFASEEEGAQVLICSEIGSEGRNFQFASHLVMFDLPFNPDLLEQRIGRLDRIG
QAKEIQVLVPYLENTAQAMLVRWYHEGLDAFEHTCPTGRTIYDAHHTQLIERLTTVGEQQ
GLDEFIHTCRQQHDSLKQQLEQGRDRLLEMHSNGGEQAQLLAQAIAEQDNDVNLVTFALN
LFDIVGINQEDRSDNLIILTPSDHMLVPDFPGLPQDGCTITFDRDQALSREDAQFISWEH
PLIRNGLDLVLSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTPV
RLLMDRKGTDLAAQVEFESFNRQLNAVNRHTSSKLVNAVQSDVHAMLQQAEALVETQARQ
LITEAQQQADLQLRRELERLEALKAVNPNIREDELTALENQREQVLSNLHEANWRLDAIR
LVVVTHQ
NT seq
2904 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcagcgctggatcagcgatacagaaagcgaacttggactggga
acggttgttgccgtcgatacgcgtatgataacgctgcttttccctgccagcggtgaaaac
cgactttattcccgcagcgatgcccccatcacccgcgtgatgttcaatcccggcgacacc
gttaccagccatgaaggttggcagctcaaggttgatgacgtgcgggaagaaaaaggattg
ctggtgtattgcggccaacgcctggacgatgaaacgcaggctgaactgcgtgaagtcttt
ctagacagcaagctcacgttcaacaaaccgcaagatcgcctgtttgccggacagattgat
cgtatggatcgctttgctctgcgctatcgcgcccgcaagcaccagaacgagcaggcgctg
caacaatggggcggtttgcgcggcatgcgtgccagcctcatcccccatcagcttcacatc
gctcacgaagtcggccaacgccatgcaccacgcgttttgctggcggacgaagtcggtctg
gggaaaactattgaagccggtatgatcatccaccagcaactactggcgggtcgtgccaat
cgcgtgctgattatcgtaccggaaaccctgcaacatcagtggctggtcgaaatgctgcgc
cgctttaacctgctgttctcactgtttgacgacgagcgctatgccgaagccaaactggac
agcagcaacccgtttgaaaccgaacagttggtgatctgctcactggggtttgttcaacgc
agtgcccagcgttttgcacagttggtcaacgctgactgggatctgctggtggtggatgaa
gcccaccatctggtctggagcgaagagagccccagcccggaataccaggcgattgaagcg
ctggctcgcgctacccctgccgtgctgctattaaccgcaacacctgaacagcttgggcag
cagagccactttgcgcgcttacgcctgctcgatcccaaccgtttccacgactatcaggaa
ttcgttgccgaacagcagcagtaccgtccggtcgccgatgccgtcactctgctattagcg
ggtgaaaccgctcaggcggctgagctaaatgcgctgagcgatcttctgggtgaacaggac
attgagccgttgctgaaatccatcaacagcgacagcgatgacaaccagaaagcgcgtcag
gaactgatcaccatgctgatggatcgccacggcaccagccgtgtgttgttccgcaatacg
cgtcagggcgttaaaggcttcccccagcgtatcctgcatcagatccgcttgccgctgccg
gcgcagtaccaaacggccattaaagtgtccggcattatgaacgcgaacaagccactggaa
acccgcgcgcgcgacatgctgtacccagaacaaatttatcaacagctcgaaggggacgac
gccacctggtggaacttcgatccgcgtgtcgaatggttgctgaactacctgacggccaat
cgtgatgaaaaagtgctggtaatctgtgctcaggcagccacagcgctacagttggagcag
gtgctacgcacacgtgaggctattcgtgccgccgtcttccatgaagggttgtctattctg
gaacgtgaccgtgccgccgcctatttcgcttccgaagaagaaggcgcacaggtgttgatc
tgttcagagatcggctccgaaggccgtaacttccagtttgccagccatttagtgatgttc
gatttgccattcaaccccgacctgctggaacagcgtattggtcgtctggatcgtatcggg
caggcaaaagaaattcaggttctggtgccgtatctggaaaatactgcacaggccatgctg
gtacgctggtatcacgaagggttggatgcgtttgagcacacctgtccaacaggccgcact
atctatgatgcacaccatacacagttgattgagcgactgacgaccgtcggtgagcagcag
ggattggatgaatttatccatacctgccgccagcagcacgacagcctgaagcaacagctt
gaacaaggccgcgatcgtctgctggaaatgcattctaacggtggcgagcaggctcagttg
ctggcgcaggccattgctgaacaggataatgacgtcaatctggtgacatttgccctgaac
ctgtttgatattgttggcatcaatcaggaagatcgcagcgataacctgatcatactgacg
ccatccgatcatatgctggtgccggatttcccaggtttgccgcaggacggctgtacgatc
accttcgatcgcgatcaggcactttcccgcgaagacgcgcagtttatcagttgggaacac
ccgctcattcgtaacgggctcgatctggtactgtccggcgataccggaagctgtgcggtt
tccctgctgaaaaataaagcgctgccggtcggcacactgctggctgagctagtttacgtt
gtggaagctcaggcaccaaaacacttgcaactgacccgcttcctgccgccaacaccggtt
cgtctgctgatggatcgtaaaggcacggatctggcggcacaggttgagtttgagagcttc
aaccgccagctcaacgcagtaaaccgtcatacgtccagcaagctggtgaatgcagtgcaa
tccgatgttcatgcgatgctgcaacaggcagaagcgttggtagaaacgcaggcgcgccag
cttatcaccgaagcgcaacagcaggccgatctgcaactgcgccgcgaactggaacgtttg
gaagcactgaaagccgtcaatccaaacattcgtgaagatgagctgaccgcgttggaaaat
cagcgcgagcaggtgctgagcaacctccacgaggccaactggcgtctggatgcgatccgt
ctggtcgtggtaacacatcagtag
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