Pectobacterium wasabiae: A7983_05315
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Entry
A7983_05315 CDS
T04535
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws00040
Pentose and glucuronate interconversions
pws01100
Metabolic pathways
pws02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A7983_05315
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A7983_05315
Enzymes [BR:
pws01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A7983_05315
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AOR62692
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Position
1169417..1170541
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AA seq
374 aa
AA seq
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MKYLLPTAAAGLLLLAAQPAMAANTGGYATTDGGDISGAVKKTARSLQEIVDIIEAAKVD
SKGKKVKGGAYPLIITYNGNEDSLIKAAEKNICGQWSKDARGVQIKEFTKGITIQGTNGS
SANFGVWIVNSSNVVVRNMRFGYMPGGAQDGDAIRVDNSPNVWIDHNEIFAKNFECKGTP
DNDTTFESAVDIKKGSTNVTVSYNYIHGIKKVGLSGASNTDTGRNLTYHHNIYRDVNSRL
PLQRGGLVHAYNNLYDGITGSGFNVRQKGIALIESNWFENALNPVTARNDSSNFGTWELR
NNNITKPADFSKYNITWGRPSTPHVNADDWKSTGKFPSISYKYTPVSAQCVKDKLANYAG
VGKNLAVLTAANCK
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacctattgcctacggcagccgctggattgttattactcgctgcacagccagcg
atggccgcaaatacgggcggctatgccaccacagatggtggagatatttccggtgccgtg
aaaaaaaccgcacgttccctgcaagaaatcgtggatattattgaagccgcgaaagtggat
tcaaaaggcaagaaagtcaaaggcggcgcttatccgctcattatcacctataacggtaat
gaagattcattaatcaaagcggctgaaaagaatatctgcggccagtggagtaaggacgcc
cgcggcgtacaaatcaaagagttcaccaaaggcattaccattcagggtaccaatggctca
tccgccaactttggcgtctggatcgtgaattcctctaacgtcgtggtacgtaatatgcgc
ttcggttatatgccgggcggtgcgcaagacggtgatgccattcgtgttgataactctcca
aacgtctggattgaccacaacgagatttttgccaaaaactttgagtgtaagggcacacca
gacaacgacacgacttttgagtcagcggttgatatcaagaaaggctcaactaacgtcacg
gtatcctacaactacattcatggcatcaagaaagtcggtctaagcggcgcaagcaatacg
gacacaggtcgtaacctgacttaccatcacaatatctatcgcgatgttaattcacgcctg
ccgctgcagcgtggtggtctggttcatgcctacaacaacctgtatgacggcatcactggc
tctggctttaacgttcgccagaaagggatcgcgctaatcgaaagtaactggttcgaaaat
gcactgaacccggtgacagcacgtaacgacagctccaactttggtacctgggagttgcgt
aacaacaacatcaccaaaccggcagacttctccaaatacaacattacctggggtcgccct
tccacacctcacgtcaatgctgatgattggaaaagtaccggaaaattcccttccatctct
tacaaatacacgccagtttcggcacagtgtgtgaaggataaactggcaaactatgctggc
gtaggtaaaaacctggcagtactgacagcagctaactgcaaataa
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