Pectobacterium wasabiae: A7983_05320
Help
Entry
A7983_05320 CDS
T04535
Name
(GenBank) pectate lyase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws00040
Pentose and glucuronate interconversions
pws01100
Metabolic pathways
pws01120
Microbial metabolism in diverse environments
pws02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
A7983_05320
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
A7983_05320
Enzymes [BR:
pws01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
A7983_05320
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-ProteinID:
AOR62693
LinkDB
All DBs
Position
1171250..1172374
Genome browser
AA seq
374 aa
AA seq
DB search
MKYLLPSAAAGLLLLAAQPTMAANTGGYATTDGGNVAGAVNKTARSMQDIIDIIEAAKLD
AKGKKVKGGAYPLVITYNGNEDALIKAAENDICGQWSKDARGVEIKEFTKGITIIGTNGS
SANFGIWLTKSSDIVIRNMRFGYMPGGAQDGDAIRIDNTPNVWIDHNEIFAKNFECKGTK
DGDTTFESAIDIKKASTNVTVSYNYIHGIKKVGLSGFSSSDTGRDLTYHHNIYDDVNARL
PLQRGGKVHAYNNLYTNITSSGLNVRQKGIALIERNWFENAKNPVTSRYDGSNFGTWDLR
NNNVMSPADFAKYNIIWDKDTKPYVNAEDWKSTGTFPSVSYSYSPVSAQCVKDKLVNYAG
VNKNLAVLTAANCN
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatctactgccttctgcagccgctgggctgttattgcttgcagcccaaccgacg
atggcggcaaatacggggggttatgctaccactgacggcggtaacgttgccggtgccgta
aacaaaacagcgcgttccatgcaagatatcattgatattatcgaagcggcgaaactggac
gctaaaggtaagaaagtcaaaggtggcgcttacccgctcgtcatcacctataacggtaat
gaagatgcgctgatcaaagctgctgagaatgatatctgtggtcaatggagtaaagacgct
cgcggtgtggaaatcaaagagttcaccaaagggatcactatcatcggtaccaatggttct
tccgccaacttcgggatctggctgacgaaatcatccgatatcgtcatccgtaatatgcgt
tttggttacatgccgggcggtgcgcaggacggtgatgcaattcgtatcgataacacgcca
aacgtctggattgaccacaacgagatctttgccaagaactttgagtgtaaaggtacaaaa
gacggtgacaccacattcgaatccgcaattgatatcaagaaagcgtctaccaacgtgacc
gtgtcgtacaactacattcacggcatcaaaaaggtaggactgagcggcttcagcagcagc
gatacgggtcgtgatctgacttaccatcacaatatttacgatgacgttaacgctcgcctc
ccactgcaacgtggcggcaaggttcacgcttacaacaacctgtataccaacatcaccagc
tctggcctgaacgtgcgccagaaagggattgcgctgatcgaacgtaactggttcgaaaat
gccaaaaacccggtgacctcacgttacgacggttccaacttcggtacctgggatctgcgt
aataacaacgtgatgagcccagccgatttcgcgaaatacaacatcatctgggacaaagat
accaagccctacgtgaatgctgaagactggaaaagcaccggcacgttcccttctgtttct
tacagctactctccggtttcggcacagtgcgtgaaggacaagctggtgaactatgctggc
gtgaacaaaaaccttgcggtgctgacagcagcaaattgcaactag
DBGET
integrated database retrieval system