Pectobacterium wasabiae: A7983_05930
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Entry
A7983_05930 CDS
T04535
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws03420
Nucleotide excision repair
pws03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7983_05930
03430 Mismatch repair
A7983_05930
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pws03400
]
A7983_05930
Enzymes [BR:
pws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7983_05930
DNA repair and recombination proteins [BR:
pws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7983_05930
MMR (mismatch excision repair)
Other MMR factors
A7983_05930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
Reg_prop
Motif
Other DBs
NCBI-ProteinID:
AOR62814
LinkDB
All DBs
Position
complement(1316191..1318353)
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AA seq
720 aa
AA seq
DB search
MDVSDLLDGLNDKQRAAVAAPRSNLLVLAGAGSGKTRVLVHRIAWLLSVENCSPYSIMAV
TFTNKAAAEMRHRINHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLIRALNLDEKQWPPRQAMWFINGKKDEGLRPQHIESYGNPIEQTWQRVYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHVLNHYRERFTNILVDEFQDTNRIQYAWIHMLAGDS
AKVMIVGDDDQSIYGWRGAQVENIQLFLKDFSGAETIRLEQNYRSTSNILKAANALIAHN
GGRLGKNLWTDGVEGEPISLYCAFNELDEARYVVNRVKAWQENGGALKDNAILYRSNAQS
RVLEEALLQQSMPYRIYGGMRFFERQEIKDSLSYLRLIANRNDDAAFERVVNTPTRGIGD
RTLDVVRQTARDRQLTLWQATRALLQEKVLAGRAAASLQRFIELIDALAYETSELPLHVQ
TDRAIKDSGLWSMYEQEKGEKGQARVENLEELVTATRQFSYQEEDQDLMPLQAFLSHAAL
EAGEGQADANQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMEKLTITYAESRRLYGKEAYHRPSRFVGELPEECVEEVRLRASVSRPVNHQRLG
TPITQNDSGYKLGQRVRHAKFGEGTIVNLEGSGDHARLQVAFQGQGIKWLVAAYAKLETV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgatggcctcaacgacaaacagcgtgccgcggtagccgcg
ccgcgcagcaatttattggtgctggcgggggcaggcagcggcaagactcgggtactggtt
catcgcattgcctggctcttgtctgttgaaaactgttcgccgtactccatcatggcggtg
acgtttaccaataaagccgcggcagagatgcgtcatcgtatcaatcacttgattggcacc
agtcagggtggcatgtggattggcaccttccatggattggcacaccgtctgctgcgcgca
caccatatggatgccaacctgccgcaggatttccagattctggacagtgacgatcagttg
cgtttgctgaagcggctgattcgggcgctgaatctggacgagaaacagtggccgccgcgt
caggcgatgtggttcatcaacggtaaaaaagacgaaggtttacgtccgcagcacattgaa
agctacggcaaccctatcgagcaaacgtggcagcgtgtctatcaagcctatcaggaggcg
tgcgatcgtgccggacttgtggatttcgccgaactgctgctgcgcgcgcatgaactgtgg
ctgaataagccgcatgtgctgaatcactatcgtgagcgttttaccaatattctggtggac
gaatttcaggataccaaccgtattcaatacgcctggatccacatgctggcgggcgatagc
gccaaggtcatgatcgttggggatgacgatcagtcaatttacggctggcgtggggcacag
gtcgaaaatattcagttgttcctgaaggatttttctggtgcagaaacgatccgtctggag
cagaactatcgttcgaccagcaatatcctgaaagcggcgaatgccctgattgcccacaac
ggcgggcggcttggtaagaacctctggacggacggtgttgagggcgagcccatttcactt
tactgcgcgttcaatgaactggatgaggcacgttacgtcgtcaaccgagttaaagcctgg
caggaaaacggtggtgcgctgaaagataacgctattctttaccgtagcaacgcccagtca
cgtgtgctggaagaggcgctgttacagcagagtatgccgtaccgcatctacggcggaatg
cgcttcttcgaacgccaggaaatcaaagattcgctgtcttatctgcgcctgatcgctaat
cgtaacgatgatgcggcgttcgaacgcgtggtgaatacgccgacgcgcggtattggcgat
cgcacgctggacgtagtgcgtcagacggcgcgcgatcgtcaattgacgctgtggcaagcc
acgcgggcgctgttgcaggagaaggtgctggccgggcgtgcggcggcatcgctgcaacgc
tttatcgaattgatcgatgcgctggcctatgaaacctctgaactgccgctgcatgtgcag
accgaccgggcgattaaagattctggtctgtggagcatgtacgaacaggagaaaggcgag
aaagggcaggcgcgggtagaaaacctggaggaactggtgacggcgacgcgccagttcagc
tatcaggaagaagatcaggatctgatgccgcttcaggcgttcctgtcgcatgctgcgctg
gaagcgggtgaaggtcaggctgatgccaatcaggacgctgtgcagcttatgacgctgcac
tcggcgaaagggctggagttcccacaggtatttatcgtcggcatggaagaaggcatgttc
cctagccagatgtcgctggatgaaggtgggcgtctggaagaagagcgtcgtctggcttat
gttggcgtcacgcgtgccatggaaaagctgacgataacctacgccgagtcccgtcggtta
tacggtaaagaagcctatcatcggccttcccgatttgtcggtgaactgccggaagagtgt
gttgaagaggtgcgattacgtgccagcgtctcccgcccggtcaatcaccagcgccttggc
acgccgataacgcaaaatgacagcggctacaagctggggcagcgggttcgccatgcgaaa
ttcggcgaaggcaccatcgtgaatcttgagggcagcggcgatcacgcccgtcttcaggtc
gcgtttcagggacagggtattaaatggctggtcgccgcttatgccaaactggaaacggtg
tga
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