Pectobacterium wasabiae: A7983_11980
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Entry
A7983_11980 CDS
T04535
Name
(GenBank) rhamnogalacturonate lyase
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
A7983_11980
Enzymes [BR:
pws01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
A7983_11980
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GFIT
Motif
Pfam:
CBM-like
fn3_3
Rhamnogal_lyase
CarboxypepD_reg
CarbopepD_reg_2
CdAMP_rec
EMC7_beta-sandw
SdrD_B
Motif
Other DBs
NCBI-ProteinID:
AOR63961
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Position
2644566..2646263
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AA seq
565 aa
AA seq
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MLAPYGYSAQDNAVSLSVSGLNTVLDNGLLKVTFGEDGSAVSMVTGDKNIVTNLSGAVRD
PSKTRSAYLDYYVNNGSVKGVKDFTPERVEVLRNDREMAHVAYIDDRGGLLKLEYHLIMR
RGVSGLYSYVVAENSGNQNVNVSELRNVYRFDPARLDHLYSGVRQGKPLLYRQLEASPKV
QDETWRLPDGSIYSKYDFAGYMRAAPFWGVFGNGVGAWLIHGNREYFSGDALKQDLLVHQ
DAIILNYMTGSHFGTPDMKAPPGWKKFYGPWLLYINQGDTEQMLADAQRQALTETVSWPY
QWVNDPRYAFERTQVSGRVASQQPVTVVLSSSLDEPFDVQTRGYSYQATTDSQGSFAISH
VRPGNYHLAVYANGGTQPGVLAEQTLSVSGDKKMLPMITLPKAEPIVWAIGQANRQASEF
RFGNEARNTRWQHEVPADLTFDIGRSDYQRDWYYAQTKPGKWDIRFALQPEKKTYFLNIA
LAAASNSGMSEPTTPQLAVMVNGTTLETLTYDNDKAIYRGALQSGRYHVARIPVSSGFLK
NGNNTITLQLKGGSVMYDVVTLSEE
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgctggcaccctatggctatagtgcacaggataatgccgtgtcgttatccgtttcgggc
ttgaataccgtgctggataatggcttgctgaaagtcacattcggggaggatggcagcgcg
gtgagtatggtgacgggggacaaaaatattgtcaccaacctgtccggtgcggtgcgcgat
ccgagcaaaacccgtagcgcttacctcgattactatgtcaataatggcagtgttaaaggc
gtcaaagattttacccctgagcgcgtagaggtgctacgtaacgatcgtgagatggcgcat
gtcgcctatatcgacgatcgcggcgggctgctaaaactcgaataccacctgattatgcgg
cgcggcgttagcggtctttatagctatgtggtggccgaaaatagcgggaatcagaatgtt
aacgtcagtgaactacgtaacgtttaccgcttcgatcctgcgcgattagaccatctctac
agtggcgttcgtcagggcaaaccgctgctctatcgtcagcttgaggcctcgccaaaggtg
caggatgaaacctggcgactgccggatggcagtatctattctaaatatgattttgctggc
tacatgcgtgccgcccctttctggggcgtcttcggtaacggtgtgggtgcatggttgatt
cacggcaatcgggagtatttctccggcgatgcgctcaagcaggatttactggtgcatcag
gatgcgatcattctgaactatatgacggggtcgcactttggcacgccggatatgaaagcc
ccgccgggctggaaaaaattctacgggccgtggctgctgtacattaaccagggcgatacc
gaacagatgctggcggatgcacagcgtcaggcgctgacggaaacggtcagttggccgtat
caatgggtgaacgatccccgctatgcgtttgaacgcacgcaggttagcggacgcgttgct
agccagcagcccgtcaccgtcgtgctttcatcatcattggatgagccgtttgatgtgcaa
acccgtggctattcgtatcaggcaacgacagactcgcagggaagttttgccatttctcat
gtccgtccgggtaattaccatctggccgtgtacgccaacggcggtacgcagccgggagta
ttggcagagcaaacgctgtccgtttctggtgataagaaaatgctgccgatgataacgctg
ccgaaagctgaaccgattgtctgggctattggacaggcaaatcgtcaggcgagcgaattc
cgctttggtaacgaggcgcgcaacacccgctggcagcatgaggttccggctgatttgacg
tttgatattggccgtagcgactatcagcgtgactggtactacgcacaaaccaaaccggga
aaatgggatatccgttttgctctacaacctgaaaagaaaacctatttcctgaacatcgct
ctggcggcagccagcaacagcggtatgagtgaaccgactacgccgcagttggcggtaatg
gtaaacggcactacgctggaaacgctgacttacgacaacgataaagccatctatcgcggt
gcgctgcagagtggtcgctatcacgttgcgcgtatccccgtgtcatccggtttcctgaaa
aacggtaacaacaccatcacactgcaattaaaaggcggcagcgtgatgtatgacgtggtg
acgttaagcgaggaataa
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