Pectobacterium wasabiae: A7983_13715
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Entry
A7983_13715 CDS
T04535
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
A7983_13715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pws03400
]
A7983_13715
Enzymes [BR:
pws01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
A7983_13715
DNA repair and recombination proteins [BR:
pws03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
A7983_13715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
AOR64290
LinkDB
All DBs
Position
3016555..3019953
Genome browser
AA seq
1132 aa
AA seq
DB search
MFRIYHSNQLDILKELMVELIKRQPLADPFQQEVILVQSPGMAQWLQIELAGDFGIAANI
QFPLPGVFLWNMCRHVLSDIPKESAFSKGAMTWKLMHLLPDLLEQPDFAALNHYLQDDEN
QRKLHQLAGRVADLFDQYLIYRPEWIKAWQEGKQVDDLGGNQLWQSALWRALVDYTRELA
QPEWHHAILYQRFINALEQEKTCPKGLPPRVFICGISALPPIYLQALNALAQHIDVHLLF
TNPCRHYWSDIQDYKFLAKLKARNRRIHCFDSEQTDETRPLFRDLSQAEMLFNDDGKQSI
NNPLLASWGKLGRDNLYLLAELDNVQEIDAFVESDGENLLQTLQRDILELEDRAVVAVSH
ETQNTSTQKRLLLLDDRSVDFHACHSPQREVEVLHDRLLAMMADDPELMPRDVIVMMADI
DSYTPFIQAVFGNAPDNRYLPFAISDQRARHAHPALQAVISLLDLPTSRFTAEQVLALLE
VPALAARFGIQEEGLRRLRLWVVESGVRWGLDDDNVRDLMLPPTGQHTWRFGLTRMLLGY
AMDSRVGDWQGVLPYDESSGLIAELAGQLAELLMQIHQWRQRLSQPRVLVDWLPLCRELI
ETFFDADSETEAALALVEKQWQYVISMGTMARYPQQVPISRLRDELSRRLDQERLSQRFL
AGSINFCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMGRKIKRGDRSRRDDDRYL
FLEALLSAQRKLYISYIGRSIQDNTRRYPSVLVSELTEYIAQSYVLPGDEALDIDSSAER
VVKHLCREHSRMPFDANNFLPVPQPLSFAAEWLAAANRKGEAQPDFDREALSERTSDRSV
SLDDLKRFYRHPVRAFFQLRLGVSFMLHSDELLDEEPFVVDNLNRYQLNSELLNTLINEG
DTEKLYRRARAAGELPYGAFGEIYWQEQQQDMAQLAARVRDELTPTLSVSREVDIILDGV
RVSGWLNQVQPDGLLRWRPGTLSMKDGITLWLEHLAYCAAGGQGESRLYGREDTAWRFAA
LSEAQAREHLSVMLDGYRQGMSKPLLLLNKAGSAWLAECYDRESDSLRSDEETQNKARAR
LLQAWQGNMGMRGEGEDYYLQRIVRELDEKRMNEVVEAAQIWLLPPFRSNLA
NT seq
3399 nt
NT seq
+upstream
nt +downstream
nt
atgtttagaatctatcactccaatcagttggatatcttgaaagaactgatggttgagctg
ataaaacgtcagccacttgcggaccccttccagcaggaagtgattttggtgcaaagccca
gggatggcgcagtggttgcaaattgaactggctggggattttggtattgctgccaacatt
caattcccgttgcccggtgttttcttgtggaatatgtgtcgccatgtgctgtcggatatt
ccaaaagaaagcgcctttagcaagggtgcgatgacgtggaagctcatgcatttgctgcct
gatttactggaacagcctgattttgcggcgctcaatcactatttgcaggatgatgagaac
cagcgcaagctgcatcagttggccgggcgcgtggcggatcttttcgatcaatatctgatt
tatcgccccgagtggattaaagcatggcaagaggggaaacaggttgacgatctcggtggt
aaccaactgtggcagtcggcgctgtggcgtgcgctggtggattacacgcgcgaattggcg
cagcccgaatggcaccatgcgattctgtaccaacggtttattaatgcgctagagcaggaa
aaaacatgcccgaaaggcctgccgccacgcgtttttatttgcggtatttcggcactcccc
cccatctatttacaggcgctgaatgcgctggcgcagcacattgatgtgcatctgttattt
accaatccctgtcgccattactggagtgacattcaggattataaatttctggcgaagcta
aaagcccgcaaccgtcgtatacactgctttgatagcgaacagactgatgaaactcgcccg
ttgtttcgcgatctctcacaggcggaaatgctgttcaatgacgacggtaaacagtcgatt
aataacccgttactggcatcgtggggcaaactggggcgagataacctttatctgctagct
gagctcgataatgtgcaggagatcgatgcctttgttgaatcggatggtgaaaatctactg
caaactttgcagcgcgatattcttgaattggaagatcgcgcagtggtagccgttagccat
gagactcaaaacaccagcacgcaaaagcgcctgctactactcgacgatcgctcggttgat
tttcacgcttgccatagtccacaacgtgaggttgaagtgcttcacgatcggctgttggcg
atgatggcggacgatcctgagttgatgccgcgtgatgtcattgtgatgatggcggatatc
gatagctatacgccgtttattcaggcggtatttggcaatgcgccggataaccgctaccta
ccttttgccatatctgaccagcgtgcgcgacatgcgcatcccgcattgcaggcggtgatc
agcctgctggatttacccacaagccgttttacggcggaacaggttctggcattgcttgaa
gtgcctgcactggctgcccgtttcggtattcaggaagaagggttacgacgtctgcgcctg
tgggtggtggagtcgggtgtacgttgggggttggatgatgacaacgtgcgcgatcttatg
ttgccaccaacaggccagcatacgtggcgttttggcttgacgagaatgctgctgggctat
gcgatggacagccgggtcggcgattggcagggggtgctgccttacgatgaatccagcggt
ttgattgcagagttggccggtcaactggctgaactgctgatgcagatccatcaatggcgt
cagcgtctgtctcaaccgcgtgtgcttgtcgattggctaccgctctgtcgagaactgatc
gaaaccttctttgatgctgacagcgagactgaagccgcgctggcattggttgaaaagcag
tggcaatacgtgattagcatgggcacgatggctcgttatccgcagcaggtgccgatttcc
cgactacgtgatgaactgtcacggcgtctcgatcaggagcgacttagccagcgatttttg
gccggatctatcaatttctgtacgctgatgcctatgcgttctattccgtttaaggtcgtg
tgtttattgggcatgaatgatggcgtttacccacgaacgctaccgccgcttgggttcgat
ctgatggggcgaaaaatcaaacgtggtgaccgtagccgacgtgacgatgatcgctaccta
tttcttgaggcgctcttgtcggcacagcgcaagctttatatcagctatatcgggcgctcg
atccaagataatacgcgccgctatccttctgtattggtcagcgaactgacggagtatatc
gcacagagttacgtcctgccgggtgatgaagcgctggatatcgatagcagcgcggagcgt
gttgtgaagcatctctgccgcgagcatagccgcatgccttttgatgcgaataattttctg
ccggtgccacagccgttgagctttgcggcagaatggttagcggcggcgaaccgaaaaggg
gaagcccagcctgattttgatcgtgaagcgctctcggaaagaacgagtgatcgcagtgtc
agtttggacgatttgaagcgtttctatcgtcaccctgttcgagccttctttcaactgcgg
cttggcgtgagttttatgctgcacagcgacgaactgttggatgaagaaccctttgtggtt
gataaccttaaccgctatcaattgaatagtgaactgcttaacaccttgattaatgaaggt
gatacggaaaaactgtatcgtcgcgccagagccgcaggcgagctgccctatggggcattc
ggtgaaatttactggcaggaacaacagcaggatatggcgcaactggctgcgcgtgtgcgt
gatgagctaacgccaacgctgtcggtgagtcgggaagtagacattatccttgacggcgtg
cgcgtcagcggttggctgaatcaggtacagccggatggtttgctgcgttggcgtccaggt
acgctttctatgaaagacggaattacgctgtggttggaacatttggcttactgtgccgcg
ggcgggcagggcgaaagtcggctgtatgggcgggaagacactgcgtggcgctttgctgcc
ttgtcggaagcgcaggccagagaacacctgagcgtcatgctggatggatatcgtcaggga
atgagtaagccgctattactgctcaataaagcagggagtgcgtggttagctgaatgttat
gatcgtgaaagtgatagcctgcggtcggatgaggagacgcagaacaaagcgcgtgcccgc
ttgctgcaagcctggcagggcaatatgggaatgcggggcgaaggcgaagattattacctg
caacgtattgttcgtgaattggatgaaaaacgaatgaatgaagtggttgaagcggcacaa
atctggctactgccaccgttccgctctaatctggcttga
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