Pectobacterium wasabiae: A7983_13985
Help
Entry
A7983_13985 CDS
T04535
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws03030
DNA replication
pws03430
Mismatch repair
pws03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A7983_13985
03430 Mismatch repair
A7983_13985
03440 Homologous recombination
A7983_13985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pws03032
]
A7983_13985
03400 DNA repair and recombination proteins [BR:
pws03400
]
A7983_13985
Enzymes [BR:
pws01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A7983_13985
DNA replication proteins [BR:
pws03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A7983_13985
DNA repair and recombination proteins [BR:
pws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A7983_13985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AOR64341
LinkDB
All DBs
Position
3080281..3083763
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKVGPLVKKAAALGMPALAITDFTNLCGLVKFYGGAHGA
GVKPIIGADFYVESDELGDELAHLTVLAMNNEGYQNLTLLISHAYQRGYGAAGPTIDRDW
LIEHQEGLILLSGGRRGDVGRFLLRGNQAQAEQCVAFYQEHFPQRYYLELTRTSRPDEES
YIHSAVELATKYGLPVVATNEVCFISTDDFDAHEIRVAIHDGYTLDDPKRPRHYSPQQYM
RSEEEMCELFADIPEALVNSVEIAKRCNVTIRLGEYFLPQFPTGEMSTADFLVQCSKKGL
EDRLEFLFPEPEVRAARRPEYDERLDIELGVINQMGFPGYFLIVMEFIQWSKDNDVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDMVIDHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVISPTKITDFAPLYCDSEGNHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALEMINARRAKQGQEPIDIAAIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLAGYTLGGADMLRRAMGKKNPVEM
AKQRGGFEDGAKSRGVNGELAVKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNQGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLADALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYSTVPPWPEQVVLDGERETLGLY
LTGHPITQYIKEIERYAGGVRLKDMHPTDRGKMTTAVGLVLAARVMVTKRGNRIGVCTLD
DRSGRLEIMLFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTVRELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGAAWRVTPAD
ALLNELRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaaccacgttttgttcacctgcgtgttcacagtgactattccatgatcgatggg
ctggccaaagtcggtccgctggtaaaaaaagcggcggcgctcggtatgccagcgctggcg
attaccgattttaccaacctgtgtggtctggttaaattctatggcggcgcgcatggtgcg
ggggtcaaacctatcatcggcgcagacttctatgtcgaaagcgatgaattaggagatgaa
ctggcgcatctcacggtgctggccatgaacaatgaaggctaccagaatctcacgttgctg
atttcccatgcttatcaacgtggttatggtgcagccgggccgacgattgaccgtgattgg
ctgattgaacatcaggaagggctgatccttctgtctggtggccgccggggtgatgttggc
cggtttttgctgcgtggtaatcaggcacaagctgaacagtgtgtggcgttctatcaggaa
cacttcccccagcgttactatctggaactgacccgtacatcgcgtcccgatgaagaaagt
tacatacactcggccgtggaattggcaaccaagtacgggttacccgttgtagcgactaat
gaagtgtgctttatcagcactgatgattttgatgctcacgaaatccgcgtggccattcac
gatggctacacgcttgacgatcccaaacgcccacgtcattacagcccgcagcagtacatg
cgctcagaagaggaaatgtgcgagctgtttgccgacatccccgaagcgctagtgaacagc
gttgaaattgccaagcgctgtaacgtaacgatccgcttgggtgaatattttctgccgcag
ttccctacgggtgagatgagcaccgcagattttctggttcagtgttctaaaaaagggttg
gaggatcgtctcgaattcctgttccctgaaccggaagtgcgtgctgcacgtcggccggaa
tatgatgagcgtctggatattgagctgggcgttatcaaccaaatggggttccctggctac
ttcctgatcgttatggagtttatccagtggtcgaaggataacgatgtgcctgttggccca
ggacgcggttccggtgcaggctcattggtcgcttacgcgctgaaaatcaccgatctagac
ccgctggaattcgatctgctgtttgaacgcttcctcaatcctgaacgtgtctctatgcct
gacttcgatgtcgatttctgcatggaaaaacgcgacatggtcatcgatcacgttgcggaa
atgtatgggcgtgatgcggtatcgcagattatcacctttggtacgatggcggcgaaagcg
gttattcgtgacgtagggcgcgtgctcggacacccttatgggtttgtcgatcgtatttca
aaactggtgccgcccgatccgggcatgacgctggaaaaggcgtttgcagccgagccgcag
ttgccagaaatttatgaagccgatgaggaagttaaggccctcatcgatatggcacgcaag
cttgaaggggtcacgcgtaacgccggtaaacatgccggtggggtggtgatatcccccacg
aaaataaccgatttcgcgccgctgtattgtgattcggaagggaatcacccggttacccag
tttgataagaacgacgtggaatatgccgggctggtgaaattcgacttccttggcctgcgt
acattgaccatcatcgactgggcgctggagatgatcaacgcccgtcgtgcgaagcaaggt
caggaaccgattgatatcgccgccattccgctcgaggataagaaaagcttcgacatgctg
caacgctcggaaaccactgcggtattccagcttgaatcgcgtggcatgaaagatctgatt
aagcgcctgaagcccgactgttttgaagatatgatcgctctggtggcgctgttccgcccc
ggcccactgcaatccggcatggtagataacttcatcgaccgtaagcatgggcgtgaagcg
atttcgtatccagatatcgaatggcagcacgagtcactcaagcccgtactggagccgacc
tacggcattatcctgtatcaagaacaggtcatgcagatcgcgcaggttctggcaggctat
acgctgggcggcgcggatatgttgcgtcgtgcgatggggaaaaagaaccccgtcgagatg
gcgaagcagcgtggtggctttgaagatggtgccaaatctcgcggcgtgaacggtgagttg
gcggttaaaatttttgacctggtggaaaaattcgctggttacggctttaataaatcacac
tccgcagcttatgcgctggtgtcttaccaaacgctgtggctgaaggcgcactatccggct
gaattcatggcggcggtgatgacggccgatatggacaacacggataaagtggtggggctg
gttgatgaatgttggcggatggggctaaaaatcctgcccccggacatcaatagcggcctg
tatcacttccacgttaatgacgatggcgagattgtttacggtatcggtgcgattaaaggt
gtaggtgagggcccgattgaggcgattatcgaagcgcgtaatcagggcggctattttaga
gaattgttcgacctctgcgcgcgtaccgacatcaaaaagctgaaccgccgcgtgttggaa
aagctgattatgtctggggcattcgaccgcttggggccgcatcgcgctgcgctgatgaat
tcattggctgatgcgctgaaggctgccgatcagcatgcgaaagcggaggccatcggtcag
gtggatatgttcggcgtgctggccgatgcgcctgagcaggttgagcaatcctacagtacg
gtgccgccgtggccggagcaggtggtgctggatggtgaacgggaaacgctggggctgtac
ctgaccggccacccgatcacgcaatatattaaggaaattgaacgctatgccggtggcgtg
cgtttgaaagatatgcacccgacggatcggggtaaaatgaccactgccgttgggctggtg
ttggcggctcgcgtcatggtcaccaaacggggtaaccgtattggtgtctgtacattggac
gatcgttccggtcggcttgagattatgctgtttaccgatgcattggaaaaatatcagcat
ttacttgagaaagaccgtatccttatcgccagtggacaggtcagctttgatgacttcagc
ggcgggcttaaaatgaccgtccgagagttaatggatatcagtgaagcgcgggaaaaatac
gcgcgcgggcttgctatctcgctgactgacaggcaaattgatgaccagctattaaaccgt
ctccgccaatcgttggaaccccatcgatcggggacgatcccagtgcatctctattaccag
cgtgaagatgcgcgcgcccgactacgtttcggcgcagcatggcgtgtaacgcctgccgat
gcgctactgaacgagctgcgtacattagtgggtaatgagcaggtggaactggaatttgac
taa
DBGET
integrated database retrieval system
