Pectobacterium wasabiae: A7983_16155
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Entry
A7983_16155 CDS
T04535
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A7983_16155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pws03019
]
A7983_16155
Enzymes [BR:
pws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A7983_16155
Messenger RNA biogenesis [BR:
pws03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A7983_16155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
UTP25
P-loop_SecA
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
AOR64757
UniProt:
A0A1D7Z4Q7
LinkDB
All DBs
Position
3567412..3568854
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AA seq
480 aa
AA seq
DB search
MSFDSLGLSADILRAIEEQGYRDPTPVQRQAIPVVLEGRDLMASAQTGTGKTAGFTLPLL
QLLTSREAQHKGKGRRPVRALILTPTRELAAQIDENVKAYSKYLPLRSLVVFGGVSINPQ
MMKLRGGVDILVATPGRLLDLEHQRAVDLSQIEILVLDEADRMLDMGFIHDIRRVLAKLP
AKRQNLLFSATFSDEIKALANKLLANPASVEVVRRNTPSELVTQHVHFVDKRRKRELLSQ
LIGENNWQQVLVFTRTKHGANHLAELLEKDGITAAAIHGNKSQGARTRALANFKDGSIRV
LVATDIAARGLDIDQLPHVVNYELPNVPEDYVHRIGRTGRAEATGEALSLVCVDEHKLLR
DIERLLKREIPRIAIEGYEPDPSIKAEPIVNGRQGNRGGGGGGARNASPRAQSGAPRGQS
ERSQGQGERRPADGNRQPRKAGGNSDSPWGTGGKGNGGKSSGEGQRRAPRPQNRSKPADK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttgattctctcggcctgagtgccgatattctgcgcgcgattgaagagcagggt
tatcgcgatcctacccctgttcagcgtcaggcgatccctgtcgtgctggaagggcgcgat
ttaatggccagcgcccaaacgggaacgggcaaaacggcaggttttacgctgccgctattg
caactgctgaccagccgtgaagcgcagcataaagggaaaggtcgccgtccagtacgcgcg
ctgatcctgacgccaacccgcgaattggcagcgcagattgatgagaacgtgaaggcgtat
agtaaatatttacccctgcgttcactggtcgtattcggcggtgtgagtattaacccgcag
atgatgaagctgcgcggcggtgtggatattctggtggcgacgccggggcgtctgctcgat
ctggaacatcagcgcgccgttgacctgtcacagatcgaaattttggtgctggatgaagcg
gaccgtatgctggatatgggcttcattcacgatattcgtcgtgtattggcgaagctgccg
gctaaacgccaaaacctgctgttctccgcgaccttctcggacgagatcaaagcgctggcg
aacaaactgctggctaatccagcctcggttgaagtcgtgcgtcgtaatacaccgtctgaa
ctggttacgcagcacgtacattttgtcgataagcgccgcaagcgtgaactgctatcgcag
ttgattggtgaaaataactggcagcaggtgctggtctttacccgaaccaagcacggggct
aaccacctggctgaactgctggaaaaagacggtatcaccgctgcggctatccacggtaat
aaaagtcagggcgcgcgtactcgtgcgttggcaaacttcaaagacggcagcattcgcgtg
ctggtcgcgacggatattgctgcgcgtggtctggatatcgaccaactgccgcacgtggtg
aactatgagttaccgaacgtgccagaagattacgttcaccgcatcggccgtaccggccgt
gcagaagcgacgggcgaagcgctgtcgctggtgtgtgtagatgaacacaaactgctgcgt
gacatcgaacgtctgctgaagcgtgagattccacgtatcgctatcgaaggctacgagccg
gatccgtccatcaaggccgagccgattgtgaatggtcgtcagggcaaccgtggcggtggc
ggcggtggtgcgcgcaacgcctctcctcgcgcacagtctggcgcgccacgcggtcagtct
gagcgtagccagggtcagggcgaacgccgtccggccgatggcaatcgccagccgcgtaaa
gcgggcggtaatagcgatagcccgtggggtactggcggaaaagggaatggcggcaagagt
agtggcgaaggccaacgccgcgcgccgcgtccgcaaaaccgcagtaagccagcggacaag
taa
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