Pectobacterium wasabiae: A7983_17540
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Entry
A7983_17540 CDS
T04535
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pws01002
]
A7983_17540
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pws01011
]
A7983_17540
Peptidases and inhibitors [BR:
pws01002
]
Cysteine peptidases
Family C82
A7983_17540
Peptidoglycan biosynthesis and degradation proteins [BR:
pws01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
A7983_17540
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Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AOR65028
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Position
3855895..3857622
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AA seq
575 aa
AA seq
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MLLLHKRKMVRLLLRVGCLWVGSLSPSFSVLAAAPTVVSAGVVSVENSRVGLLAALPHGM
TVHYLADLSSLYAQNRMQPMWADNRAVQQFQQQLAELAIAGIQPQFTTWVSWLTDPQLTG
FARDIVLSDAMLGYLQFVSGVERNGNDWLYSSVPYRLQSPAVNIISQWQQAVNSGTSAAY
VASLTPSHSQYAKMHEALKTMLTDNRPWPSLNLTESLRPEQQSRELVALREILQRTGMLS
STESITLFNENVSATTTPLTEQTPVVNGAVNADDRYTGELVEAVKRFQHWQGLEDDGVIG
KRTRDWLNVSPQTRATLLALNIQRLRLVPDNVHTGIMVNIPNYSLIYYQDGAERLASRVI
VGQPKRKTPLMSSSLYNVVVNPPWNVPTTLTRQDIIPKVVRDPGYLQRHGYTVLSGWSQD
AEVIDPSMIEWQGVSAERFPYRLRQAPGANNSLGRYKFNMPNSEAIYLHDTPNHNLFQRD
IRALSSGCVRVNKASELASMLLQDAGWNNSRISSTLDQGNTTFVSMKHRIPVNLYYLTAW
VAEDGRPQFRTDIYNYDDTARSGTKVLPKAGLLLL
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgttgttgttacataagcgaaaaatggtcaggttgttgttgcgcgtgggttgtctttgg
gtcggaagcctgtccccttcgttttcggtgctggcagcagcgcctacggtggtatccgca
ggtgtcgtttctgtagaaaatagccgtgtagggcttttagctgcgctaccacacggtatg
acagtacattatctagcggatttatcctcgctttatgctcagaaccggatgcaaccgatg
tgggcagataatcgcgcggttcaacagttccagcagcaacttgccgaattggcaatagcg
ggcatacaaccgcaattcactacgtgggtaagttggctgaccgatcctcaattaaccggg
tttgcgcgtgatatcgtgttatcagacgcgatgttgggctatttgcagttcgtctctggt
gtagaacgcaacggtaacgattggctgtatagcagcgtgccttatcgcctgcaatcgccc
gcagtcaatatcatttcccaatggcaacaggccgtaaactccggcaccagcgcagcctat
gttgcttcgctgacgccctcgcattcgcaatacgccaaaatgcatgaagcattgaagaca
atgctgacggacaatcgcccgtggccgagcctgaatctgaccgaatctctacgcccggaa
caacagagccgcgaactggtggcgttgcgtgaaattctgcaacgtactggcatgttgtcg
tcaacggagagcatcacgctttttaatgaaaatgtctccgcaaccaccacgccgctaacc
gagcaaacgcctgtcgtcaatggtgcggttaatgcagacgatcgctacacgggcgagttg
gtcgaggcggttaaacgcttccagcattggcagggcctggaggatgatggtgtgattggt
aagcgcacgcgcgattggctcaatgtttctccgcaaacgcgcgcgacgctgctggcgttg
aatatccagcgtttgcgcctggtaccggataatgttcataccggtattatggtgaatatc
cccaattactcactgatctattatcaggacggtgctgagcgtttagcgtcgcgcgttatt
gtcgggcaaccgaaacgcaagacaccgctaatgagcagttcactgtataacgtcgtggtc
aatccgccgtggaatgtgcctacaacgctgacgcggcaagatatcattcctaaggttgtg
cgcgatcctggctatctgcagcgccatggctatacggtgttgtctggctggagtcaggat
gcagaggtgattgacccttcaatgatcgagtggcaaggggtgtcggcagagcgtttccca
tatcgtctgcgtcaggcacctggcgcaaataactcgttggggcgctataaatttaatatg
ccgaactcggaagcgatttatctgcatgacacgcctaatcataatctgtttcagcgagat
atccgggcgctaagctccggttgcgtgcgggtcaataaggcatcggaactggctagcatg
ctgctacaggatgcaggctggaataatagccgcatttcttccacgttggatcagggaaat
accacctttgtttcaatgaaacatcgcataccggttaatctctattacctgaccgcgtgg
gtggctgaagatggcaggccgcaattccgaacagatatttacaattatgatgataccgcc
cgatcggggacgaaagtacttcccaaagcagggctgttgcttctgtaa
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