Pectobacterium wasabiae: A7983_18575
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Entry
A7983_18575 CDS
T04535
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pws03016
]
A7983_18575
Enzymes [BR:
pws01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
A7983_18575
Transfer RNA biogenesis [BR:
pws03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A7983_18575
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
AOR65225
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All DBs
Position
4068946..4070070
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AA seq
374 aa
AA seq
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MNYQLITSDIGLQQICAQAQRFPQVALDTEFVRTRTYYPQLGLIQLYDGEQLSLIDPLTI
TDWAPFQALLRDEQVTKFLHAGSEDLEVFLNTFGTLPTPFVDTQILAAFLGKPLSYGFAA
LVADYMGVTLDKSESRTDWLARPLSEKQCDYAAADVFYLLPMAIQLVTDTEAAGWMNAAL
DECLLLCQRKQDILAPALAYREFGNAWQLRGRSLACLQRLAEWRLRKARERDSAVNFVVR
EENLLQVARCLPSSLGELSSLGLSGPEIRYHGKTLLDCVAQTDGIADVDCPPPVINLIDH
PGYKKAFKDIKALVQRASEQSGLSAELLASRRQINRLLNWHWKLTGQDASTPEMLSGWRG
QLYGDELREIVQGY
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacttccgacatcgggttacaacagatctgcgctcaggcgcaa
cgctttccgcaggtggcattggacacggagtttgtcagaacccgcacgtattacccgcaa
ttagggttgattcaattgtatgacggcgaacagctttcgcttatcgacccgttaacgatt
accgactgggctccttttcaggcgttgctgcgtgacgagcaggtcactaaattcctgcat
gcaggcagcgaggatctggaggtgtttctcaatacgtttggaacactgccgacgcctttc
gttgatacacagattctggccgcatttttaggcaagccgctttcttatggctttgctgcg
ctggtggccgactacatgggcgtgacgctggataaaagcgagtcgagaacggactggctc
gcccgtccgctgagcgaaaaacagtgtgattacgcggccgccgatgtgttctacctgttg
ccgatggccattcaactggtgacggataccgaagccgcggggtggatgaacgccgcgttg
gacgagtgtctcctgctttgtcagcgtaaacaggatattttagccccggcattggcctat
cgtgaatttggcaacgcctggcagctacgtggtcggagtctggcttgccttcagcgtctg
gctgagtggcgcttgcgtaaggcgcgtgagcgggacagcgcggtgaattttgtggtgcgt
gaagagaaccttttgcaagtggcgcgttgtctgccgtcttcgctgggagaactgagttct
ctggggctaagcggcccagagatccgctaccacggaaaaacgctgctggattgtgtcgcg
caaacggacggcattgctgacgtggattgcccaccgccagtgattaatttgatcgaccat
cccggttataaaaaagcgtttaaagatatcaaggcgttggtacagcgcgcgagtgaacag
agtggcttgtccgccgaattattagcttcacgccgccaaattaatcgcctgctgaactgg
cactggaaattaaccgggcaagatgcgagtacgccggaaatgttgtctggctggcgcggc
cagttatatggtgatgaactgcgtgaaattgtgcagggctattaa
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