Pectobacterium wasabiae: A7983_20525
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Entry
A7983_20525 CDS
T04535
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
pws
Pectobacterium wasabiae
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pws03016
]
A7983_20525
Enzymes [BR:
pws01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
A7983_20525
Transfer RNA biogenesis [BR:
pws03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
A7983_20525
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AOR65602
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All DBs
Position
4522111..4524045
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHSQTPRVEGVVKGTDKGYGFLEADGQKSYFIPPPHMKKVMHGDRI
TATLHTEKDREIVEPETLIEPFLTRFVGRIHKKDDRLSITPDHPLLKEAIPCRAAHTVTH
DFQEGDWAVAEMRRHPLKGDRGFHAELTQYITTGDDPLVPWWVTLSRHNLERSAPEVETT
ERHDDELVREDLTALNFVTIDSASTEDMDDALYVQDNGDGSLQLTIAIADPTAYVDAGSE
LDNIARQRAFTNYLPGFNIPMLPRALSDDICSLHPNERRPVLACRVTIAADGALGDDIHF
FAASIESKAKLAYDNVSDWLENQGEWQPQNDAIAEQIRLLHRLCLARSEWRTTHALVFKD
RPDYRFLLGEKGDVLDIVVEHRRIANRIVEESMIAANVCAAIVLRDKLGFGIYNVHNGFD
PASVEQAVAVLDTHGVQADAQTLLTLEGFCTLRRELDAQPTQFLDSRIRRFQSFAEVSTT
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAVITGQAAEKPQDDVTVQLAERRRLNRM
AERDVGDWLYARYLKDKAGTDSRFNAEIIDVTRGGLRVRLLDNGAVAFIPSSFIHAVRDE
LVCSQEMGTLSVKGDVVYRQGDTLDVLIAEVRLETRSIVAKPAA
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatccgctgcttgcacagctaaaacagcaacttcactctcagacaccg
cgtgttgaaggtgtcgtcaaagggaccgataagggatatggctttcttgaagctgacggg
caaaaaagctatttcattccccctccacacatgaaaaaagtgatgcacggcgaccggatt
accgccaccctgcatacggaaaaagatcgggaaattgtcgagccagaaacgctgatcgaa
cctttccttacccggtttgttgggcgcatccacaaaaaagacgatcgcttatcaatcaca
cctgaccacccgttactgaaagaggcaattccttgccgcgccgcacacactgtgacgcac
gattttcaggaaggtgattgggcggtagccgaaatgcgtcgtcatccattgaaaggcgac
cgtggcttccatgccgagctgacgcagtacatcaccacaggcgacgatccgctggtgccg
tggtgggtgacgttgtcacgccacaatctggagcgttctgctccggaagttgaaaccact
gaacgccatgacgacgagctcgtccgtgaagatctgacggcactgaactttgtcaccatc
gacagcgccagcactgaagatatggacgatgctctgtatgtgcaggacaacggtgatggt
tcactgcaattaacgatcgccatcgccgatccaaccgcgtatgtagatgcaggcagcgag
ttggacaacattgcgcgccagcgcgcctttaccaactatttgcccggcttcaacatcccg
atgctgccgcgcgcgctgtcagacgatatctgttccctacacccgaacgaacgtcgccct
gtcctcgcctgccgcgtgacgattgctgccgacggtgcgctgggtgacgatatccacttc
tttgccgcctcgatcgaatccaaagccaaattagcgtatgacaacgtctctgactggttg
gaaaatcaaggcgaatggcagccacagaacgacgcgattgccgaacaaatccgtttgctg
caccgcctctgcctggcacgcagcgaatggcgcaccacgcatgctctggtgtttaaagat
cgcccggattatcgtttcctgctgggtgaaaaaggcgacgtgttggatatcgtggttgaa
caccgccgcatcgccaaccgtatcgttgaagaatccatgattgccgccaatgtctgtgcg
gcgattgtgctgcgcgataagctgggtttcggcatctataacgtgcataacgggttcgat
cctgcttcggttgaacaagcggttgcggtactggatacgcatggtgttcaggccgatgca
cagacgttgctgacactggaaggtttctgtacgctgcgccgcgaactggatgcccaaccg
acacagttcctggatagccgtatccgtcgcttccagtctttcgcggaagtgagcaccacg
ccagggccacactttggtctggggctggaagcctatgcaacctggacatccccgatccgt
aaatacggcgatatggtgaaccaccgtttgctgaaagcggttatcaccggacaggctgcg
gaaaaaccgcaggatgacgtcacggtacaactggccgaacgccgtcgccttaaccgcatg
gctgagcgcgatgtcggcgactggctgtacgcccgctacctcaaagataaagccggcacg
gatagtcgcttcaacgcggaaatcattgatgtcacgcgcggcggcctgcgcgttcggctg
ctggataacggcgcagtggcgtttatcccgtcctcctttatccatgccgtgcgtgatgag
ttggtgtgtagccaggaaatgggcaccctctcggtgaaaggcgacgtggtttatcgtcag
ggggatacgctggacgtcctcatcgctgaagtccgtctggaaacccgcagcatcgtggca
aaacctgccgcataa
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