Pectobacterium wasabiae: A7983_20945
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Entry
A7983_20945 CDS
T04535
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pws
Pectobacterium wasabiae
Pathway
pws03420
Nucleotide excision repair
pws03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pws00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A7983_20945
03430 Mismatch repair
A7983_20945
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pws03400
]
A7983_20945
Enzymes [BR:
pws01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A7983_20945
DNA repair and recombination proteins [BR:
pws03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A7983_20945
MMR (mismatch excision repair)
Other MMR factors
A7983_20945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
Motif
Other DBs
NCBI-ProteinID:
AOR65683
LinkDB
All DBs
Position
complement(4614637..4616457)
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AA seq
606 aa
AA seq
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MPSRSVSAAYLAQASELAGNPGQLAAYNSLGHCVVLAGPGSGKTKTLVLKLARILAEDVQ
APRGAACITYSQECARELTRRLEALGLREAPNLFVGTVHGFCLRHLLMPYGRLADLPISF
PLSVASQRVSDRLLRQSGDQLFGSGHPHKAIDLGRHRRSVLDRNSTAWRSEEELAAWTEA
YESALRQDGLIDYDDMVVFGQRLIVEHDWVLPLVQAKFPVLAVDEYQDLGVALHRMVKRL
VFEGGVRLFAVGDSDQSIYGFTGANGALLMELAGSEGVETVRLQLNYRSGAGIVSASEMA
LGEARGYRANDPNRQTTIEFVLCPEGMADQATHAIAQIIPAALAAKPGRTLGDIAILYRD
YRAGDIVADAVTAGGFDYIRVDNAAPYRKVALTSWVEDCAAWCAGGWRVGRPQLRGLIDR
YLAFHRTRLDDAQARREGQRLTALLWALRADQQPARDFVTSLRNGIVDSLLGTELVLADQ
AEQLNRMSAALAEGGALAALDIVSLGGRDGSPDHLNLLTLHSAKGCEYDVVIMVGLDLGN
LPWRGETPEKLRESRRLFYVGLTRARDEVHMLYSGFVDGRYGSMRQGRSPFLDELEGRMR
EAGLRQ
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgccgtcgcgtagtgtaagtgcagcctacctagcccaggcttccgagttggctggaaat
cctggtcagttagccgcgtataactccctggggcattgcgttgtgcttgccgggcctgga
agtggcaagaccaagacacttgtactgaaactggcccgtatcttggccgaggatgttcag
gcaccgcgtggtgctgcatgcatcacatatagccaggaatgcgcgcgtgagttgacacgt
cgtcttgaagcgctggggctcagagaggcaccgaatctctttgtcggaaccgttcatggg
ttctgtttgcgtcatctgttgatgccttatgggcgattggccgatctgccgatctcattt
ccgctgtcggtggcttctcagcgtgtgagtgatcggttactgcgacaatctggtgatcag
ctctttggctcaggtcatccccataaggccattgatctcgggcggcatcgccgttcagtg
ctggaccgcaacagcactgcttggcgttcagaggaggaactcgctgcctggaccgaggct
tacgaatcggcattacggcaggatgggctaatcgactacgacgacatggtggtattcggc
cagcgtctgatcgtcgagcatgattgggttttgcccttagttcaggcgaaatttccggtc
ctcgcggtggatgaatatcaggatttgggggtggcgctccatcgtatggtcaagcgtctg
gtttttgaggggggcgtgcgcttgttcgctgtgggtgattcagaccagtcgatatacggt
tttactggggccaatggtgcgttgctcatggagctggcaggcagtgaaggcgttgaaaca
gttaggctccaattaaactatcgttcaggtgcgggtatcgtcagtgcttctgagatggcg
ctgggtgaggctcgtggttatcgcgcgaatgatccaaaccgtcagacgactattgagttt
gtgttgtgtcctgaggggatggcggatcaagcgactcatgccattgcacagatcatccct
gctgctttggctgctaaaccaggacggacgcttggtgatattgccattctgtacagagac
tatcgtgccggagatattgtggctgatgcggtgaccgctggtggttttgattatatccgt
gtggataacgcagcaccttatcgcaaggttgccttgaccagctgggtggaagattgcgcc
gcatggtgcgccggtggctggcgtgttggtcgtccgcaattgcgtgggctaatagaccgc
tacctcgcgtttcatcggacgagattggatgatgcgcaagctcgacgtgaggggcagagg
ctaaccgcgctgctttgggctctacgcgccgaccaacagcctgcgcgtgattttgtcacg
tcgctgcgcaatggtatcgttgattcgttgctgggcactgagctggtgcttgcagatcag
gctgagcaattgaatcgcatgtctgcagcgcttgccgaaggtggtgcgttggcggcgttg
gatattgtgagtttgggtgggcgtgatggctcacctgatcaccttaatctgctgacgctc
cactctgccaaaggctgcgaatacgacgtggtcattatggtcggcttggatctgggcaat
ctgccgtggcgtggtgagacgccagaaaagctgcgtgagagccgtcgccttttctatgtg
gggctaactcgagcacgggatgaggttcatatgctgtattctggttttgttgatggtcgc
tacggctcgatgcgtcaggggcgttccccatttctggatgagctggaggggcggatgcgt
gaggctggtttacggcagtag
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