Polynucleobacter wuianus: A8O14_02560
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Entry
A8O14_02560 CDS
T09802
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pwu
Polynucleobacter wuianus
Pathway
pwu03410
Base excision repair
pwu03430
Mismatch repair
pwu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
A8O14_02560
03430 Mismatch repair
A8O14_02560
03440 Homologous recombination
A8O14_02560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pwu03400
]
A8O14_02560
DNA repair and recombination proteins [BR:
pwu03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
A8O14_02560
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
A8O14_02560
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
A8O14_02560
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
ANI99073
UniProt:
A0A191UDE4
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Position
complement(477056..478819)
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AA seq
587 aa
AA seq
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MSLFSQRPFSERTATWLQQSGLHPLLARLYAARGLESPEELSLELKNLLSPAELKNCLST
ASLLADILEKQESMLIVADYDCDGATACAVGLRGLRMLGGADTPIQFLVPNRFTMGYGLT
PEVVELAAQQHPKPKYLITVDNGIASEAGVDRARELGMEVIVTDHHLPGDRLPKATAIVN
PNQPGCTFSSKALAGVGVMFYVLVALRAELRKRGKFTNETQPKIENLLDLVALGTVADVA
QLDRNNRVLVSNGLKRIRAGISQPGIQALFQAAGRDPRKANTFDLGFAIGPRLNAAGRLA
DMTLGIRLLLTDNADEAMTLAQELDRINRERRVIETGMQETALAHLSEDQLAGTMAQRTS
ICLWNPEWHQGVVGIVASRLKERFNRPAIVFAPDGNTGEELRGSGRSLTGFHLRDALDIV
SKREPGLILKFGGHAMAAGLTIRKNDFEKFDACFQEVANSLLTDEILERRHPHDGALQPS
EFTSEIGDLLAEEIWGQGFPQPVFYGDFEITQQSLMKEKHLRLMVRPLGSDASESTLAAK
QLTAVWFNRTQSLPAKARLAYRLVTDRYQGQARVQLMIEAHDETPAT
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgagcctcttttctcaacgccccttttctgagcgcactgccacttggctacaacaaagt
ggacttcatccactattggcacgtttatatgccgcgcgtggcttggagtctcctgaagag
ctgtcactagaactcaaaaatctactttctccagcagaactcaagaattgcctctctact
gcaagcctgcttgcagacatcctagagaaacaagagtctatgctcatcgttgcggactat
gactgcgacggcgctactgcttgcgcggtaggtcttcgtggcctgcggatgctaggtgga
gcggataccccgattcagtttctcgtgcccaaccgctttacgatgggctatggcttaacc
cctgaagtagttgagctcgcagcacaacaacatccaaaacctaaatacctcatcactgtt
gataacggtattgcgagtgaagcgggagtcgatcgtgcccgagaacttggtatggaagtg
attgtcaccgaccatcatttacctggtgatcgactaccaaaagctacggcaattgtgaat
cccaatcaaccgggctgtactttctctagtaaagcgcttgctggtgtaggggtgatgttc
tatgtattagtagcactgcgtgcagaactgcgtaagcgcggtaaatttactaatgagact
caacctaaaattgagaacctcttagaccttgttgcactaggaacagttgctgatgttgcg
caactcgatcgcaataatcgcgtcttagtctcgaatggcttgaaacgcattcgtgccggc
atctctcagcctggtatacaagcgttattccaagcagcaggccgcgatcctcgcaaagcc
aatacttttgatttaggttttgctattggcccaagactcaacgctgccggacgcctagcc
gatatgactttgggcatacgcctactgttaaccgacaatgcagatgaagcgatgacgctt
gcgcaagagctagatcgcatcaatcgcgaacgccgtgtaatcgagactggaatgcaggaa
acggcgcttgctcatctttcagaagatcagttggcaggaacaatggcacaacgcacgagc
atttgcctgtggaatcctgaatggcatcaaggtgtcgttggcattgtggcttcgcgtctc
aaagagcgttttaatcgccctgccattgtttttgctcctgatggcaatactggagaagag
ttacgtggctcgggaagatcgttgacgggatttcatttgcgagatgcactcgatattgtt
tccaagcgagagcctggactcattctgaaatttggtggccatgcaatggcagcaggcctg
acgattcgcaaaaatgactttgaaaagtttgatgcctgttttcaggaagtggcgaatagc
ttattgaccgatgagatcctcgagcgtcgccatcctcacgatggcgcccttcaaccttct
gaatttacgtctgagattggtgacctgcttgcagaagaaatctggggccaaggatttcca
caacccgttttctatggagactttgagattactcagcaaagcctcatgaaagagaaacat
ctacgcctgatggtccgccctctaggatctgatgcatcagaaagtacattagcggctaag
cagttgacagctgtctggtttaaccgcacccaaagcctgcctgctaaagccaggcttgcc
tatcgcctagtcacggatcggtatcagggtcaagcccgtgtgcaattgatgattgaggct
catgacgagacccctgcgacctga
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