Polynucleobacter wuianus: A8O14_03470
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Entry
A8O14_03470 CDS
T09802
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pwu
Polynucleobacter wuianus
Pathway
pwu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8O14_03470
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwu03019
]
A8O14_03470
Enzymes [BR:
pwu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A8O14_03470
Messenger RNA biogenesis [BR:
pwu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8O14_03470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
AAA_19
ResIII
AAA_22
UTP25_NTPase-like
UvrD-helicase
P-loop_SecA
CMS1
Motif
Other DBs
NCBI-ProteinID:
ANI99242
UniProt:
A0A191UE70
LinkDB
All DBs
Position
complement(644202..645491)
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AA seq
429 aa
AA seq
DB search
MLFTDLGLSESILHAIAEEGYTSPTPIQAKSIPAVLKGGDLLAAAQTGTGKTAGFTLPIL
QRLSSTPKSSGKRLLRVLILTPTRELAAQVQESVLTYGKYTGLKSTVIFGGVGANPQIKA
IAGGLDILVATPGRLLDLMSQNCVSLSDIEILVLDEADRMLDMGFLRDIKKILAALPKKR
QNLLFSATFSAEIKQLADGLLNSPELIEVARSNSANEAIAQLIHPVDRTKKHPLLAHLIK
TNDWKQVLVFTRTKHGANKLVTQLEKDGITSMAIHGNKSQSARTKALADFKAGKLTALVA
TDIAARGIDIDQLPHVVNYDLPNVSEDYVHRIGRTGRAGSNGVAVSLVCVDEHQMLRDIE
KLIKQKLPQEVIAGFEPDPNAVAQPIQLRSQQHQQSRKPRPAGGNNSSGAPAKKASAKRG
NPPKRSFSR
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
atgttattcacagatcttggtttatccgaatccattcttcacgctatcgctgaagaaggc
tacacaagtcccacccctatacaagcaaaatcaattcctgcagttttaaagggtggcgat
cttttagcagctgcgcaaacaggtactggcaaaactgctggctttaccctaccgattctg
caacgcttaagtagcacgcctaaatctagcggcaaacgattgttacgagtattaatcttg
actcctactcgcgagctagcagctcaagtccaagagtctgtattgacttatggcaagtac
accggattaaagtccaccgtcatctttggcggtgttggcgcaaacccgcaaattaaagcg
attgctggcggcttagatatcttggttgccacacccggtcgcttacttgacctcatgtca
caaaactgcgtatcactgagcgatattgaaatcctagttttggatgaggctgatcgcatg
ctcgatatgggcttcttacgcgatattaaaaagatcctagctgccctacctaagaaacgt
cagaacttacttttctcagcaactttctctgctgagattaaacaattagcagatggtcta
ctcaattctccagagttaattgaggtagcacgcagcaatagcgccaatgaagcgattgct
cagcttattcatccggtggatagaaccaagaaacatccgctcttggcgcacctgattaaa
acgaatgactggaagcaggttctggtcttcacacgcaccaagcatggtgccaataagctt
gtaactcaattagaaaaagatggcattaccagcatggccattcatggcaataagagtcag
tctgcccgtactaaagcgctggctgatttcaaggcgggtaagttaactgccttagtcgct
acggatattgcggctcgaggtatcgacattgatcaattgccacatgtcgtgaactacgac
ctacccaatgtctctgaagattatgtgcatcgtattggacgtactggtcgcgctggatca
aatggtgttgcggtctccttagtttgcgttgacgaacaccaaatgctgcgtgacattgaa
aaactgattaagcaaaagttacctcaagaggtaattgctggatttgagccagaccccaat
gcagttgcccaaccgattcaactgcgtagtcaacagcatcagcaatccagaaagcctcgc
ccagccggaggtaataactccagtggtgcacctgctaaaaaggcatcagcaaaacgaggt
aacccgcccaaaagaagctttagtcgctaa
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