Polynucleobacter wuianus: A8O14_03615
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Entry
A8O14_03615 CDS
T09802
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
pwu
Polynucleobacter wuianus
Pathway
pwu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8O14_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwu03021
]
A8O14_03615
03019 Messenger RNA biogenesis [BR:
pwu03019
]
A8O14_03615
Transcription machinery [BR:
pwu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
A8O14_03615
Messenger RNA biogenesis [BR:
pwu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A8O14_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_5
AAA_25
UvrD-helicase
Motif
Other DBs
NCBI-ProteinID:
ANI99264
UniProt:
A0A191UE29
LinkDB
All DBs
Position
complement(671422..672684)
Genome browser
AA seq
420 aa
AA seq
DB search
MQLTELKVLHVSALLEMAASLEIENTQRMRKQELMFAILKKRAKAGETVFGDGTLEVLPD
GFGFLRSPEASYMASPDDIYISPAQIRRFNLHTGDSVEGEVRTPKDGERYFALVKVDKIN
GLAPEALKNRIMFENLTPLHPNRVIGLERDIKAEENLTGRIIDMISPIGYGQRGLIVASP
KSGKTVMMQHIAHAISANNPDAILIVLLVDERPEEVTEMQRSVRGEVVASTFDEPAVRHV
QVAEMVIEKAKRLVEMGKDVIILLDSITRLARAYNTVVPSSGKVLSGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALIETGSRMDDLIYEEFKGTGNMEVHLERRLAERRVYPSINL
NKSGTRREELLVKPENLQKIWVLRKLLADMDDIEAMNFIVDKLKSTKNNGEFFDLMRRGG
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgcaattaactgaactcaaagtcctccacgtatccgctctgctcgaaatggcagccagc
ttggagattgaaaatacccaaaggatgcgcaaacaagaattgatgtttgcaattctgaag
aaacgcgctaaagcaggtgaaaccgttttcggtgatggcactttggaagtcttgccagat
ggctttggtttcttgcgctctcctgaagcctcttacatggcttcaccggacgatatctat
atctctcctgcacagattcgccgctttaaccttcacactggtgacagcgtggaaggtgaa
gtacgcactcctaaagatggtgagcgttactttgctttggtaaaggtagacaagatcaac
ggtttggctcctgaagccctcaagaaccgcatcatgttcgagaacttaacgcctttgcac
ccaaaccgcgtgatcggcttagagcgtgatatcaaggctgaagagaacttaactggccgc
attatcgacatgatctctccaattggttacggccaacgtggcttgatcgtagcgtcacca
aaatccggtaagaccgtgatgatgcagcacattgctcacgcaatctctgcgaataatcca
gatgcgattttgatcgtcttgctcgttgacgagcgccctgaagaagtgactgagatgcaa
cgctccgttcgcggtgaagtagttgcctctacttttgatgaacctgcagtgcgtcacgtg
caagttgctgagatggtgattgaaaaagcaaaacgcttagtagagatgggtaaagatgtg
atcatcttgcttgactcgattacccgtttggcacgcgcatacaacactgttgttccttca
tcaggcaaagttctctctggtggtgtggatgcaaatgcattacaacgtccgaaacgcttc
ttcggtgcggcacgtaatattgaagaaggtggttcattgaccatcatcgctactgctctg
attgaaacgggtagccgtatggatgacctcatctacgaagagttcaaaggcactggcaat
atggaagtgcatcttgagcgccgtttggctgagcgtcgtgtttatccatcgattaacctc
aataagtctggtacccgccgtgaggaattactggttaaaccagaaaacctccagaagatc
tgggttttacgtaaattgctggccgatatggacgatattgaggcgatgaacttcatcgtc
gacaagctcaaatcgaccaaaaacaatggggaattcttcgacctcatgcgtcgcggaggc
taa
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