Polynucleobacter wuianus: A8O14_07420
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Entry
A8O14_07420 CDS
T09802
Name
(GenBank) ATP-dependent RNA helicase
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
pwu
Polynucleobacter wuianus
Pathway
pwu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pwu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A8O14_07420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pwu03019
]
A8O14_07420
Enzymes [BR:
pwu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
A8O14_07420
Messenger RNA biogenesis [BR:
pwu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
A8O14_07420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
P-loop_SecA
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ANI99911
UniProt:
A0A191UG73
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All DBs
Position
complement(1442796..1444238)
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AA seq
480 aa
AA seq
DB search
MTNTETEITSSAGADNIVAPSDSSVTSATPPATITFADFGLDPKIQKAVLEQGYTIPTPI
QAQSIPHVLAGSDLMGAAQTGTGKTAAFVLPIIQKILRHASNSASPARHPIRALVLTPTR
ELAVQVAENAASYSKHTDLRAAVVYGGVDMKEQVGILRNGVEILIATPGRLLDHIGSKVA
NLSQVEILVLDEADRMLDMGFLPDLQRIINLIPAQRQTLLFSATFSPEIKKLAQSYLRTP
VTVEVARQNAAADTVKQVIHMVSSGDKQRAIVKVLENRTRQGLSRQCIIFTNSRLGCAKL
ARALERDGIKAGAIHGDKSQGERTLTLDAFKSGAIEALVATDVAARGLDIPDMPCVINHE
LPYNAEDFIHRIGRTGRAGSTGDAIALVDASEKRLLDDIEKLMKCKLDIKPLPEGTPAYA
KPPSGSAASTKGADPFFYKPYEPTSAPQSSDDTAKPEVKKVGIVAAKPAVGALLGGFKKK
NT seq
1443 nt
NT seq
+upstream
nt +downstream
nt
ttgacaaataccgaaactgaaataacttcatctgcaggggctgacaacatagtcgcccct
agtgactctagcgttactagcgctactcctccggcaacaattacttttgctgattttggc
ttagatccaaagattcaaaaggcggtgctagagcagggctataccatccctacaccaatc
caagcgcaatcgattccacatgtattggcgggaagtgacttgatgggcgccgcccaaacg
ggtactggtaaaacggcagcctttgtattgccgattattcaaaagattttgcgtcatgct
agtaatagcgcttcaccagcacgtcatccaattcgcgcgttagtcttaacgccgactaga
gagttggcagtgcaagtcgctgagaatgccgctagctattccaagcataccgatctgcgt
gcggccgttgtttatggcggcgttgatatgaaagagcaagtaggaattttgcgcaatggt
gttgaaatattgattgcgacacctgggcgcttgcttgatcacattggatctaaagttgcc
aacttatctcaggtagaaattctggttttggacgaagccgaccgcatgcttgatatgggt
ttcttgccagatttgcagcgcatcattaacttgattcctgctcaaagacaaactttgctg
ttttcagcgactttttcgccagagattaagaaattggcgcagagctatttgcgtacgcca
gtgactgttgaagtagcgcgccaaaatgcggctgcagataccgtcaagcaagtcattcat
atggtgtcatcaggcgataaacaacgtgcgattgtgaaggttttagaaaaccgtacacgt
cagggtttatcgcgtcagtgcatcatctttaccaatagccgattgggttgcgctaagttg
gcgcgtgccctggagcgtgatggtatcaaggcgggcgcaattcatggggataagagtcag
ggtgagcgcaccttaactttggacgcatttaagtctggcgctattgaagccctagttgca
acggatgtagcggcgcgtggtttagatatcccagacatgccctgcgtgatcaaccatgag
ttgccttataacgctgaagactttattcaccgcattggtcgtactggtcgcgctggtagt
acgggtgatgcgattgctttggttgatgctagcgaaaagcgcttactagacgatattgaa
aaattgatgaagtgcaagctagacatcaagccattgcctgagggtacacctgcatatgca
aagccgccatcagggagtgctgcgtcgaccaaaggggcagatcctttcttctataaacct
tatgagcccacttctgcgccacagtcatctgacgatactgcaaaaccagaagtaaaaaaa
gttggcattgtggctgccaagcctgcagttggcgccctgttgggtggattcaaaaagaag
taa
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