Polynucleobacter wuianus: A8O14_09460
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Entry
A8O14_09460 CDS
T09802
Name
(GenBank) RNA polymerase sigma factor RpoD
KO
K03086
RNA polymerase primary sigma factor
Organism
pwu
Polynucleobacter wuianus
Brite
KEGG Orthology (KO) [BR:
pwu00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
A8O14_09460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pwu03021
]
A8O14_09460
Transcription machinery [BR:
pwu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A8O14_09460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_ner
Sigma70_r3
Sigma70_r2
Sigma70_r1_1
Sigma70_r4
Sigma70_r1_2
SPO22
Motif
Other DBs
NCBI-ProteinID:
ANJ00812
UniProt:
A0A191UIQ1
LinkDB
All DBs
Position
complement(1828471..1830936)
Genome browser
AA seq
821 aa
AA seq
DB search
MKATAKPAPKSKTVAKAPAKPAPKAKAPAKPVKATAKPAPKAKVVAKAPAKPAPKSKVPA
KPVKAAAKPAPKAKTVAKAPAKPVKAAAKPAKAPAKPVKAAAPTKASKAEVKVEPAKKGK
AVATKAEEVKDTKEPKGKKGKAAEVVAVVEQEKKRGRKAKADAPAEGAEPVLTDRQKARE
RKAKEKALLKEFAAQQLGTEEQQELRRARLKTLIKMGMSKGYLTHGEMNDVMSDELSDAD
ALETLISLLNDIGITVYEQAPDAETLILSDNTAAAASEEEAEEEAEAALSTVDSEFGRTT
DPVRMYMREMGTVDLLTREGEIVIAKKIEAGLKDMVMALAACPVTITEILSNVDKIASGE
MEIDQFVDGLVDPNAEDIKLGPEEPEIDPDAEEGEEGEEDESGGGGGGAATANAKQLEEL
RQISLEKFAIVRTQAEKMRRAFDKEGYNCPAYVKAQDTIRAELLGFRLTAKSVEKLCDTM
RSQVDQVWKLERGIVSLLVDKVGVNRGEVLKDFPKMSMNLTWTDKLLKENKPYSALLQRN
VPAIQELQQKLIDIQKNVVIPLPELKEVNKQMIAGEKRAREAKREMTVANLRLVISIAKK
YTNRGLQFLDLIQEGNIGLMKAVDKFEYRRGYKFSTYATWWIRQAITRSIADQARTIRIP
VHMIETINKMNRISRQILQETGHEPDAATLALKMEIPEDKIRKIMKIAKEPISMETPIGD
DEDSHLGDFIEDGNTLAPAEAALHDSMRDVVKDVLDSLTPREAKVLRMRFGVEMSTDHTL
EEVGKQFDVTRERIRQIEAKALRKMRHPSRSDKLKTFLEED
NT seq
2466 nt
NT seq
+upstream
nt +downstream
nt
gtgaaggccacagcaaaaccggctccaaaaagtaaaactgtagccaaggctccagcaaaa
cctgcgccaaaagcaaaagcaccagctaagccagtgaaggccacagcaaaaccagctcct
aaagctaaggtagttgctaaggctccagccaaaccagctccaaaatcaaaagtacctgcc
aagccagtaaaggctgctgctaaacctgcgccaaaagcaaaaacagttgctaaagccccg
gctaaaccagtaaaggctgctgccaagccagcgaaagcaccggctaaaccagtgaaggct
gctgcacctacgaaggcatctaaagcagaagtcaaagtggagccagctaaaaaaggtaaa
gcagttgcaactaaggctgaagaagtaaaagatacaaaagagcccaaaggtaaaaaagga
aaagctgctgaagttgttgcggtagttgaacaagagaaaaagcgtggccgcaaagctaag
gctgatgctcccgcggaaggtgctgagccagtgttgactgatcgtcaaaaagctcgcgag
cgtaaagcaaaagaaaaagccctcttaaaagaattcgcagcacagcagttaggtaccgaa
gagcaacaagaattacgtcgtgctcgcttgaagactttgatcaagatgggcatgtccaaa
ggctatttaacccatggcgaaatgaatgacgtgatgtctgatgagttgtctgatgctgat
gcattagaaactttgattagcttgttaaatgatattggtattactgtttacgaacaagcg
cctgatgccgaaaccttaatcctctcagataacaccgcagctgcagcttctgaagaagaa
gctgaggaagaggccgaagcagcgctctcaacggtggattcagagttcggtcgtacaact
gacccagtccgtatgtatatgcgtgagatgggtacggtcgacttgttaactcgcgaaggc
gagatcgtcattgcgaagaaaatcgaagctggccttaaagacatggtgatggctttggct
gcttgccctgtaacgattactgagattctgagcaacgttgacaagatcgctagtggcgaa
atggagattgaccaatttgttgatggcttggttgatccaaacgcagaagacattaagctt
ggacctgaagagccagaaattgatcctgatgctgaagagggcgaagagggcgaagaagat
gaaagcggcggcggtggcggtggtgctgcaacagctaacgctaagcaattagaagagttg
aggcagatttctttagagaagtttgcgattgttcgcacgcaagctgaaaagatgcgtcgt
gccttcgataaagagggctataactgtcctgcatacgtcaaagcgcaagatacgattcgt
gcggagttgcttggcttccgcttaaccgcaaagagtgttgagaagttatgcgataccatg
cgttcacaagtagaccaagtttggaaacttgagcgcggtatcgttagtctgttagtagac
aaagttggcgtcaatcgtggtgaagtattaaaagatttccctaagatgtctatgaatttg
acatggactgacaagttgctcaaagagaacaagccttatagcgcactcttgcaacgtaac
gttccagcgattcaagagttacaacagaagttgattgatattcagaagaatgtcgttatt
ccacttcctgagttgaaagaagtcaacaagcagatgatcgcgggtgagaagcgtgctcgt
gaagcgaagcgtgagatgactgtagccaacttacgtttagtaatctccatagctaagaaa
tacactaaccgtggcttgcaattcttggatttgattcaagaaggcaacatcggtttgatg
aaggcggtagataagtttgaataccgtcgtggttataagttctctacttatgcaacctgg
tggattcgccaagcgattacccgttctattgctgaccaagcacgtacgatccgtatccca
gttcatatgattgaaaccatcaacaagatgaaccgtatcagccgccagatcttacaagaa
actggtcatgagccagatgctgcaaccctagcgctgaagatggagattcctgaagacaag
attcgtaagatcatgaagattgctaaagagccaatctctatggaaacaccaattggtgac
gatgaagattctcatttgggcgacttcattgaagacggcaacaccttggctccagctgaa
gcagcattgcatgattcgatgcgcgatgtggtgaaagacgttctggattcattaacacca
cgtgaagcaaaagtattgcgtatgcgctttggtgttgagatgagtacagaccatactctt
gaagaagtaggtaagcaatttgacgttacccgtgagcgtattcgtcagattgaagcaaag
gctttgagaaaaatgcgtcatccaagccgcagcgataagctcaagaccttcctcgaagaa
gattga
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