Pseudomonas wayambapalatensis: HU734_000430
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Entry
HU734_000430 CDS
T08016
Symbol
algB
Name
(GenBank) sigma-54-dependent response regulator transcription factor AlgB
KO
K11384
two-component system, NtrC family, response regulator AlgB
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HU734_000430 (algB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
pwy02022
]
HU734_000430 (algB)
Two-component system [BR:
pwy02022
]
NtrC family
KinB-AlgB (alginate production)
HU734_000430 (algB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
Mg_chelatase
AAA
VpsR
cREC_REC
AAA_22
HTH_23
AAA_16
AAA_2
AAA_19
Xre-like-HTH
HTH_29
MCM
nSTAND3
HTH_17
HTH_50
Motif
Other DBs
NCBI-ProteinID:
QXI43291
LinkDB
All DBs
Position
87059..88405
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AA seq
448 aa
AA seq
DB search
MESAQDNQGRILLVDDESAILRTFRYCLEDEGYSVATANSAAQAETLLQRQVFDLCFLDL
RLGEDNGLDVLAQMRIQAPWMRVVIVTAHSAIDTAVDAIQAGAADYLVKPCSPDQLRLAT
AKQLEVRQLSARLEALEGEVRKPKDGLDSHSPQMMAVLETARQVATTDANILILGESGTG
KGELARAIHGWSKRARKACVTINCPSLNAELMESELFGHTRGAFTGASESTLGRVSQADG
GTLFLDEIGDFPLTLQPKLLRFIQDKEYERVGDPVTRRADVRILAATNLNLEEMVRESRF
REDLLYRLNVITLHLPPLRERSEDILTLADRFLARFVKEYSRPARGFSEEARAALLNYRW
PGNIRELRNVVERASIICPQERVEIGHLGMGEQPTGNAPKVGAALSLDELERAHIGAVLA
ASDTLDQAAKTLGIDASTLYRKRKQYKL
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atggagtcagcccaggacaaccaaggccgcattctgctggtggacgacgagtccgcgatc
ctgcgcaccttccgttactgcctcgaagacgagggctacagcgtcgccaccgccaacagc
gccgctcaggcagagaccctgttgcaacgccaggtgttcgatctgtgcttcctcgacctg
cgcctgggagaagacaacggcctcgatgtgctggcacagatgcgcatccaggcgccctgg
atgcgcgtggtgatcgtcaccgcgcactcggcgatcgacaccgcggtggatgccatccag
gccggcgccgccgactatctggtcaaaccctgcagccccgaccagttgcgcctggccacc
gccaagcaactggaggtgcgccagctgtcggcgcgcctggaagcgctggaaggtgaagtg
cgcaagcccaaggacggcctcgactcgcacagcccgcaaatgatggcggtgctggaaacc
gcgcggcaggtggcgaccaccgatgccaatatcctcatcctgggggagtccggcaccggc
aagggcgagctggcccgcgccattcacggctggagcaagcgcgcgcgcaaggcctgcgtg
accatcaactgcccctcgctgaacgccgagctgatggaaagcgagctgtttggtcatacc
cgcggggccttcaccggcgccagcgagagcacgctcgggcgggtcagccaggcagacgga
ggcacgctgttcctcgacgaaatcggtgatttcccactgaccttgcagcccaaactgctg
cgcttcatccaggacaaggaatacgaaagggtcggcgatccggtcacccgtcgggccgac
gttcgcatccttgccgcgaccaacctcaaccttgaggagatggtgcgcgaaagccgcttc
cgtgaagacttgctgtaccgcctcaacgtcatcaccctgcacctgccgccactgcgcgag
cgtagcgaggacatcctcacgctcgccgatcgcttcctcgcccgcttcgtgaaggagtat
tcgcgcccggcgcgcgggttcagcgaggaggcccgggcggccctgctcaactaccgctgg
ccgggcaacatccgcgaactgcgcaacgtggtggagcgcgccagcatcatctgcccgcag
gaacgcgtggaaatcggccatctggggatgggcgagcagcccaccggcaacgccccgaag
gttggcgcagcgttgagcctcgatgagctggagcgcgcccacatcggtgccgtcctggcg
gccagcgataccctcgaccaggccgccaagaccctcggtatcgatgcctccaccctgtac
cgcaagcgcaagcagtacaaactgtga
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