Pseudomonas wayambapalatensis: HU734_000480
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Entry
HU734_000480 CDS
T08016
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy03030
DNA replication
pwy03410
Base excision repair
pwy03420
Nucleotide excision repair
pwy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HU734_000480 (polA)
03410 Base excision repair
HU734_000480 (polA)
03420 Nucleotide excision repair
HU734_000480 (polA)
03440 Homologous recombination
HU734_000480 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pwy03032
]
HU734_000480 (polA)
03400 DNA repair and recombination proteins [BR:
pwy03400
]
HU734_000480 (polA)
Enzymes [BR:
pwy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HU734_000480 (polA)
DNA replication proteins [BR:
pwy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
HU734_000480 (polA)
DNA repair and recombination proteins [BR:
pwy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
HU734_000480 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HU734_000480 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
Obc1_cap
Motif
Other DBs
NCBI-ProteinID:
QXI43301
LinkDB
All DBs
Position
complement(98685..101432)
Genome browser
AA seq
915 aa
AA seq
DB search
MSQAPLVLVDGSSYLYRAFHALPPLTTSKGMPTGAVKGVLNMLKSLRKQYPDSLFAVVFD
AKGGTFRDAMFAEYKANRPSMPDDLRVQVEPLHASVRALGYPLLCVEGVEADDVIGTLAR
SSAAAGRPVIISTGDKDMAQLVDGHITLVNTMTGTVLDVAGVHEKFGVGPEHIIDFLALM
GDKVDNIPGVPGVGEKTAVGLLTGIGGGLRDLYENLDKVPGLAIRGAKTLPAKLEEHRDA
AFLSYELATIKVDVELDVEVDALVCGEPDREALLALYTEMEFKSWVAEVQRDAAREGDTI
APVEEPAAQVEAKYETILDQARFDVWLEKLRQAPLFAFDTETTGLDAQRAELVGLSFAVE
PHEAAYVPLAHDYEGAPKQLDRDAVLKALKPLLEDPAKAKVGQNAKYDINILANASLPIQ
MRGVAYDTMLESYVLDSTATRHDMDSLAQKYLDHSTIAFEDIAGKGAKQLTFNQIHLDKA
GPYAAEDADITLRLHHALQARLAKTPSVQPVLMDIEMPLVPVLARIERQGALVDAELLKV
QSGELGVKMAELERRAFELAGEEFNLGSPKQLGVILYDKLGMPVLSKTAKGQASTAEAVL
ADLAAEGYPLPTVLMEYRSLSKLKSTYTDKLPDQINPRTGRIHTSYQQAVAATGRLSSSD
PNLQNIPVRTPEGRRIRQAFVASPGYKLLAADYSQIELRIMAHLAKDEGLLHAFRNDLDV
HRATAAEVFGVALDAVTNDQRRSAKAINFGLIYGMSAFGLAKQIGVDRKQSQDYIDRYFA
RYPGVLAYMERTRTQAAEQGFVETLFGRRLYLPDINAKNPALRKGAERTAINAPMQGTAA
DIVKRAMVAVDNWLSDSGLDARVILQVHDELVLEVREDLVEQVKAEIRPYMSNAAQLDVP
LLVEVGVGSNWDEAH
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgagccaagcgcccctcgtcctggtggacggttcgtcctacctctaccgcgcctttcac
gccctgccgccgctgaccacgtccaagggcatgcccaccggtgcggtcaagggcgtgctg
aacatgctcaagagcctgcgcaagcaatatccggacagcctgttcgcggtggtcttcgac
gccaagggcggcactttccgcgatgccatgttcgccgagtacaaggccaaccgcccgagc
atgcccgacgacctgcgcgtgcaggtcgaaccgctgcacgccagcgtcagggccctgggc
tacccgctgctgtgcgtcgaaggcgtcgaggccgacgacgtgatcggcaccctggcccgc
agcagtgcggcagccgggcgtccggtcatcatctcgaccggcgacaaggacatggcgcaa
ctggtagacggccacatcaccctggtcaacaccatgaccggcacggtgctcgacgtggct
ggcgtgcacgagaagttcggcgtcggtcccgagcacatcatcgacttcctggccctgatg
ggcgacaaggtcgataacatcccgggtgttccgggagtcggcgagaagaccgccgtgggc
ctgttgaccggtatcggtggcggcctgcgtgacctgtacgagaacctcgacaaggtgccg
ggcctggccattcgcggcgccaagaccctgccggccaagctcgaggagcaccgcgacgcg
gcgttcctgtcgtatgagctggcgaccatcaaggtcgatgtcgagctggatgtcgaggtc
gatgccctggtgtgcggcgagccggaccgcgaagcattgctggcgctgtacaccgaaatg
gagttcaagagctgggtcgccgaggtacagcgcgacgccgcccgggagggtgacaccatt
gctccggtcgaggagcctgcggcccaggtcgaggcgaaatacgaaaccatcctcgaccag
gcgcgcttcgatgtctggctcgagaagctgcgccaggcgccgctgttcgccttcgacacc
gagaccaccggcctggatgcccagcgtgcggagctggtcggcctgtcgttcgcggtcgag
ccccatgaagcggcctatgtgccgctggcccacgactacgaaggtgctccgaagcagctg
gaccgcgacgcggtgctgaaggcgctcaagccgttgctggaagacccggccaaggccaag
gtcgggcagaacgccaagtacgacatcaatatcctggccaacgcttcgctgccgatccag
atgcgtggcgtggcctatgacaccatgctcgaatcctatgtgctcgactccaccgccacg
cgtcacgacatggacagcctggcgcagaagtacctcgaccacagcaccatcgccttcgag
gatatcgctggcaagggcgccaagcagctgaccttcaaccagatccatctggacaaggct
ggcccgtacgccgccgaagatgccgacatcaccctgcgcttgcaccacgcactgcaggca
cgcctggcgaaaacgcccagcgtgcagccggtgctgatggacatcgagatgccgctggtg
ccggtgctggccaggatcgagcgccagggcgcgttggtcgacgcggagctgctcaaggtg
cagagcggtgagctgggcgtgaagatggccgagctcgagcgtcgggcgttcgagctggcg
ggcgaagaattcaacctgggttcacccaagcaactgggggtgatcctctacgataagctg
ggcatgccggtactgagcaagactgccaagggccaggcctccacggccgaagccgtgctc
gcggacctggccgccgaaggctatccgctgccgacggtgctgatggagtaccgctccctg
agcaagctcaagagcacctataccgacaagctgccggaccagatcaacccgcgtaccggg
cgtatccacacctcctaccagcaggcggtggccgccaccgggcgcttgtcgtccagcgat
ccgaacctgcagaacattccggtacgcactcccgaaggccgacgcatccgccaggccttc
gttgccagccccggctacaagctgctggccgcggactactcgcagatcgagctgcgcatc
atggcccacctggccaaggatgaaggcctgctgcacgccttccgcaatgaccttgatgtg
caccgcgcgacggccgcagaagtattcggcgtggcgctggatgcagtcaccaacgaccag
cgtcgcagcgccaaggccatcaacttcggcttgatctacggcatgagcgccttcggcctg
gccaagcagatcggcgtcgatcgcaagcagtcgcaggactacatcgaccgctacttcgcg
cgctatcccggcgtgctggcctacatggagcgcacccgcacccaggccgccgagcagggc
ttcgtcgaaaccttgttcgggcggcgcctgtacctgccggacatcaatgccaagaacccg
gccctgcgcaaaggtgccgagcgtaccgcgatcaacgcgccgatgcagggtacggcggcc
gacatcgtcaagcgcgccatggtcgcggtggacaactggctgagcgacagtggcctggat
gcccgggtgattctccaggtgcacgatgaactggtgctggaggtgcgtgaagacctggtc
gaacaggtgaaggccgaaattcgcccctacatgagcaacgccgcgcagctcgatgttccg
ctgctggtcgaagtcggcgtaggctcgaattgggacgaagctcactaa
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