Pseudomonas wayambapalatensis: HU734_002395
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Entry
HU734_002395 CDS
T08016
Symbol
tssH
Name
(GenBank) type VI secretion system ATPase TssH
KO
K11907
type VI secretion system protein VasG
Organism
pwy
Pseudomonas wayambapalatensis
Pathway
pwy02025
Biofilm formation - Pseudomonas aeruginosa
pwy03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pwy00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HU734_002395 (tssH)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02025 Biofilm formation - Pseudomonas aeruginosa
HU734_002395 (tssH)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pwy02044
]
HU734_002395 (tssH)
Secretion system [BR:
pwy02044
]
Type VI secretion system
Imp/Vas secretion system core components
HU734_002395 (tssH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_2
AAA_lid_9
AAA
ClpB_D2-small
AAA_5
AAA_16
AAA_22
Sigma54_activat
AAA_25
Zeta_toxin
nSTAND3
TniB
AAA_7
ATPase_2
NACHT
AAA_18
Clp_N
Torsin
Hpr_kinase_C
NBD_SMAX1
Motif
Other DBs
NCBI-ProteinID:
QXI43661
LinkDB
All DBs
Position
complement(531600..534275)
Genome browser
AA seq
891 aa
AA seq
DB search
MGEISRAALFGKLNSVAYKAIEAATVFCKLRGNPYVELVHWLHQLLQVQDSDLHRIVRQF
NVEPARLARDLTDALDRLPRGSTSITDLSSQVEEAVERGWVYGSLMFGESQVRTGYLLVG
ILKTPSLRNALLGLSSEFAKLKVEALSERFDEYVGDSPENKLAASDGFTAAAPGEASGAV
APAAMGKQEALKRFTVDLTEQARSGKLDPIVGRDEEIRQLVDILMRRRQNNPILTGEAGV
GKTAVVEGFALRIVAGDVPPALKDVELRSLDVGLLQAGASMKGEFEQRLRQVIEDVQASP
KPIILFIDEAHTLVGAGGAAGTGDAANLLKPALARGSLRTVAATTWAEYKKHIEKDPALT
RRFQVVQVDEPSEPKALLMMRGVASTMEKHHQVQILDEALEAAVKLSHRYIPARQLPDKS
VSLLDTACARVAISLHAVPAEVDDSRRRIEALEVELQIIAREAAIGVATEQRQAQADTLL
TEERQRLLELENRWAEEKALVDQLLATRAQLREQVGVVDQEVDAQGSHALREQLIDLQQR
LSALQGESPLILPTVDYQAVASVVADWTGIPVGRMARNEIETVLNLDSHLGKRIIGQDHA
LKMIAKRIQTSRAGLDNPNKPIGVFMLAGTSGVGKTETALALAEAMYGGEQNLITINMSE
FQEAHTVSTLKGAPPGYVGYGEGGVLTEAVRRRPYSVVLLDEVEKAHPDVHEIFFQVFDK
GVMEDGEGRQIDFRNTLILLTTNAGTELIADICKDPQTLPEPDAVATLLRKPLLEIFPPA
LLGRLVTIPYYPLSDAMLKAITRLQLERIRKRVEATHKVGFAYDDAVVELIVSRCTETES
GGRMIDAILTNGLLPDMSREFLTRLLEGKPLASVSIGARDNELHYDFSAAG
NT seq
2676 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaaatcagccgcgccgcgctgttcggcaaactcaacagcgtcgcctacaaggcc
atcgaggccgccacggtgttctgcaagctgcgcggcaatccctacgtggagctggtgcac
tggctgcaccaactgctgcaagtgcaggacagcgacctgcatcgcatcgtgcgccagttc
aatgtcgagccggcacgcctggcccgcgatctgaccgacgccctcgatcgcctgccacgg
ggctcgacttcgatcaccgacctgtcctcgcaggtcgaagaggcagtggaacgcggttgg
gtctacggcagcctgatgttcggcgaaagccaggtgcgcaccggctacctgctggtcggc
atcctcaagaccccgagcctgcgcaatgccctgctgggtctgtcgagcgagttcgccaag
ctcaaggtcgaggccctgagcgagcgtttcgacgagtacgtcggcgactcccccgagaac
aagctggccgccagcgacggcttcaccgcggcagcgccgggcgaagccagcggcgccgtg
gcccccgctgcgatgggcaagcaggaggcactcaagcgcttcaccgtggacctgaccgag
caggcacgcagcggcaagctcgacccgatcgtcggccgcgacgaagagatccgccaactg
gtcgacatcctcatgcgtcgccgccagaacaacccgatcctcaccggcgaagcgggcgtg
ggcaaaactgccgtcgtcgagggcttcgccttgcgcatcgttgccggcgatgtaccgccc
gcgctcaaggatgtcgagctgcgcagcctggatgtcggcctgttgcaggctggcgccagc
atgaagggtgagttcgagcagcgtctgcgccaggtcatcgaggacgtccaggcctcgccc
aaacccatcatcctgttcatcgacgaagcccacaccctggtcggtgccggtggcgcggcc
gggaccggcgatgccgccaacctgctcaagccagcactggcccgtggcagcctgcgcacc
gtggcagcgaccacctgggccgagtacaagaaacacatcgagaaggatccggcactgacc
cgccgcttccaggtggtgcaggtcgatgagccgagcgaaccaaaggcgctgctgatgatg
cgcggcgtggcctcgaccatggagaagcaccatcaggtgcagatcctcgacgaagccctg
gaggcggcagtcaagctgtcgcaccgctacatccccgcccggcaattgcccgacaagtcg
gtgagcctgctcgataccgcctgcgcacgcgtggccatcagcctgcatgcagtgcccgca
gaggtcgatgacagccgtcggcgtatcgaggcgctggaagtcgaactgcagatcatcgcc
cgcgaagcggccattggtgtcgccaccgagcaacgccaagcccaggccgacaccctgctg
accgaagagcgtcagcgcctgctggagctggaaaaccgctgggccgaagagaaagccctg
gtcgatcagttgctggccacccgcgcccagttgcgtgagcaggtcggggtggtcgatcag
gaggtcgatgcccaaggcagccatgcgctgcgcgaacaactcatcgacttgcagcagcgc
ctgagcgccctgcagggcgaaagcccgctgatcctgccgaccgtcgactaccaggccgtg
gcttcggtggttgccgactggaccggtatcccggtagggcgcatggcacgcaacgagatc
gagacggtgctcaacctcgacagccacctgggcaagcgcatcatcggccaggaccacgcc
ctgaagatgatcgccaagcgtatccagacctcccgcgccggcctcgacaaccccaacaaa
cccattggcgtgttcatgcttgccggcacctcgggcgtgggcaagaccgagaccgccctg
gcgctggccgaggccatgtatggcggcgagcagaacctgatcaccatcaacatgagcgag
ttccaggaagcgcacaccgtctccaccctcaagggcgcaccgcccggctatgtcggctac
ggcgaaggtggcgtgctgaccgaggccgtgcgccgccgcccctacagcgtggtgctgctc
gacgaggtggaaaaggcccaccccgacgtgcacgagatcttcttccaggtgttcgacaag
ggcgtgatggaagatggcgaagggcgccagatcgattttcgcaacaccctgatcctgctc
accaccaacgccggcaccgagctgatcgccgatatctgcaaggacccgcagaccctgccc
gaaccggatgcggtcgccaccttgctgcgcaagccgctgctggagatcttcccgcccgcg
ctgctcgggcgcctggtaaccatcccctactacccgctcagcgacgccatgctcaaggcc
atcacccgtctgcaactggagcgcatccgcaaacgtgtcgaggccacgcacaaggtcggc
ttcgcctacgacgacgcggtggtcgagctgatcgtctcgcgctgcaccgagaccgagagc
ggcgggcgaatgatcgacgcgatcctgaccaacggcctgctgccggacatgagccgcgag
ttcctcacccgtctgctcgaaggcaagccgctggccagcgtcagcatcggcgcgcgcgac
aacgaactgcactatgacttcagcgcggccggttga
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